Cutibacterium acnes SK137: HMPREF0675_3843
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Entry
HMPREF0675_3843 CDS
T01215
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03030
DNA replication
pak03410
Base excision repair
pak03420
Nucleotide excision repair
pak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0675_3843 (polA)
03410 Base excision repair
HMPREF0675_3843 (polA)
03420 Nucleotide excision repair
HMPREF0675_3843 (polA)
03440 Homologous recombination
HMPREF0675_3843 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pak03032
]
HMPREF0675_3843 (polA)
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_3843 (polA)
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0675_3843 (polA)
DNA replication proteins [BR:
pak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HMPREF0675_3843 (polA)
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HMPREF0675_3843 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0675_3843 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
ADD99976
LinkDB
All DBs
Position
864009..866741
Genome browser
AA seq
910 aa
AA seq
DB search
MCHLDRIPLSVASSKVNDMSETTQPILMVLDGHSMAFRAFYALPVENFTTSTGQHTNAVH
GFVAMLINLLRNEKPTHVAVAWDLAGGTFRTTEYSEYKAGRAAIPPEFPGQIDLIKEVLD
ALRIVHLSKENYEADDILATLSTRATTEGFKTLLVSGDRDAMQLVNDQVTVLYPRKGVSD
LARMTPEAVEEKYLVPPARYPELAALVGESADHLLGVPGVGPKTAVKWLTAYDGLENLIR
QADTVKGKAGQSFRDHLDDVIRNRKLNALVRDLDLDLTLAELARHPWDPKATRAVFDTLE
FRTLWDRVRALATESDADGVDEVDDTLEISGTVLEPRTLNDWLSTTAGRIGVDVTGSWGS
GSGDVEAVALGGVDGNAVWFDAAELSPEDEDVFAAWLADKDRPKVMHSAKGPVEALAERG
WEVAGLTCDTELASYLLHPDRRAHKFDDAVRTHLNVALGEAEENSDQAMLDFGEDHFAES
MERAVAVTRLADVMEKEVEARGGAELLHDVEMGVQRCLISMERAGIAVDTDIFEGLRSEF
DERVTRAQEAAWEAAGEKINLSSPKQLQGVLFDKLDMPKTRRTKSGYTTDADALAGLYET
TEHPFLAHLLEHRDAIKLRQTVDGLLKEIRDDGRVHTTYMQTVAVTGRLSSKDPNLQNIP
MRTEEGRRIREGFVVGEGYESLLSADYSQIEMRIMAHVSGDQSLIDAFQSGQDFHTVTAS
HVFGVAPEDVSVAQRSKIKAMNYGLAYGLSAYGLSNQLKVSVGEAKELMADYFSRFGKVH
EYLEEVVDQARRQGYTETLLGRRRYLPDLTSTNRQRRDMAERAALNAPIQGSAADLIKLA
MLATDQKLAEAALTSRVLLQVHDELILEVAKGEEEKVREIVTNAMGHAMDLSVPLTVSIG
VGRSWFDAAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccaccttgatcgcatcccgttgtccgtggcgtcctctaaagtcaacgatatgagc
gagacgacgcagcccatcctcatggtccttgacgggcattcgatggccttccgggctttt
tacgccctgccggtcgagaacttcaccacctcgacggggcagcacactaatgcagtgcat
ggcttcgtcgcgatgcttatcaacctgctgcgtaacgagaagcccacccacgtcgcggtg
gcatgggatcttgccggaggcactttccgcaccaccgaatactccgagtacaaagccggt
cgtgccgctattccgccagagttccccggtcagattgacctcatcaaagaggtcctcgat
gctcttcgcatcgttcacttgtctaaggagaactacgaggccgacgacatccttgccact
ttgtcgacccgggcgactacagagggattcaaaacgctgctggtttctggggaccgtgac
gccatgcagctggttaacgatcaggtgacggtgctttacccacgcaagggcgtttcagac
cttgctcgcatgacgccggaggccgttgaggagaaatacctggtgcctccggcacggtac
ccggagctggcagctttggtgggggagagcgccgaccatctgctcggggttcccggtgtt
ggccctaagacagcggtgaagtggctaacggcttatgacggtctggaaaacctcatccgt
caggccgacaccgttaaggggaaggcgggacagtccttccgcgatcacctcgacgacgtc
atccgtaaccgcaagctcaatgccttggtccgtgaccttgaccttgacctcaccctggcc
gagcttgcccgtcatccctgggacccgaaggctactcgcgcggtctttgacaccctggaa
tttcgcaccctgtgggaccgcgttcgtgccctggccaccgaatctgatgccgatggggtc
gatgaagtcgacgacaccctcgagatctcagggacggtcctggaaccacggacattgaat
gattggctgtccacaactgcaggtcgcataggcgtcgacgtcactggtagctggggaagt
ggatctggagatgtggaagctgtcgcgctgggaggcgtcgacggtaatgcagtgtggttc
gacgccgccgagttgagccctgaagacgaggacgtctttgccgcctggctggccgacaaa
gaccgtcctaaggtcatgcattcagccaagggtccggtagaggccctcgccgagcgcggc
tgggaggtcgcgggcctgacctgtgataccgagcttgcctcgtacttgctgcatccagat
cgccgtgcccacaagtttgacgatgcggtacgtacccacctcaacgtcgccctgggtgag
gcagaggaaaactctgaccaggccatgctcgattttggggaagaccattttgctgagtcg
atggagagagcagtggctgtcaccaggctggctgacgtcatggagaaagaggtcgaggcg
cgcggcggggccgagctgctgcatgatgtcgagatgggggtacagaggtgccttatctca
atggagcgtgccggtatcgccgtcgatacggacatctttgaagggttgcgctccgagttc
gacgagcgggtaacacgagcccaggaggctgcgtgggaagcagctggggagaagatcaat
ctgtcctcgcctaaacagttgcagggagtgctgttcgacaagctcgatatgcctaagacc
cggcgtactaagtccgggtacacgactgacgcggacgctctggctgggttgtacgagacg
accgagcatcctttccttgcccatcttctcgagcaccgagacgccatcaagttgcgtcag
accgttgatgggttgctcaaggagatccgtgatgacggtcgagtccacaccacgtatatg
cagacggttgccgtgactggaagattgtcgagcaaggacccgaaccttcaaaacattccg
atgcgtaccgaagagggacgacgcatccgcgaagggtttgttgtcggtgaggggtacgaa
tccctcctgagcgctgactactcgcagatcgagatgcggattatggcgcacgtatctggg
gaccaatctctcattgacgccttccagtcgggtcaggactttcacaccgtgacggcatca
cacgtattcggcgttgctcccgaggatgtcagcgtggcgcaacgttccaagatcaaggcc
atgaattacggactggcctatggattgagtgcctatgggttatctaaccagctcaaggtc
agcgtgggtgaggctaaagaactcatggccgactacttcagccggttcggaaaggtacat
gagtatctcgaagaagtcgttgaccaggcgcgtcgtcagggatacaccgagactctcctg
ggacgtcgtcgttaccttcctgacctcacctcaacaaaccgtcagcgccgagacatggcc
gagcgtgccgccctcaacgctcccattcagggatcggcagcggacctcatcaaactggcc
atgctcgccaccgaccagaaacttgctgaggcagctttgacaagccgggtgttgctgcag
gttcatgatgaactcatccttgaggttgccaagggtgaagaggagaaggttcgcgagatc
gttaccaacgctatgggacacgccatggacctatcggtcccgttgacggtgtcaattggg
gtcggacggtcctggttcgatgctgcgcactga
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