Cutibacterium acnes SK137: HMPREF0675_3955
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Entry
HMPREF0675_3955 CDS
T01215
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03030
DNA replication
pak03430
Mismatch repair
pak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0675_3955 (holA)
03430 Mismatch repair
HMPREF0675_3955 (holA)
03440 Homologous recombination
HMPREF0675_3955 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pak03032
]
HMPREF0675_3955 (holA)
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_3955 (holA)
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0675_3955 (holA)
DNA replication proteins [BR:
pak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0675_3955 (holA)
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0675_3955 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ADE00113
LinkDB
All DBs
Position
979058..980080
Genome browser
AA seq
340 aa
AA seq
DB search
MQTSLAHWRGYRSCGILGQVNSVYGTALLVQGAEALLSDRAVDARIKAARREFPDAELVE
LEGREVDAGRFVEATGGSLFSQATIVVVNAVSDLDKDLFDLVATTAANPPDTLCLILVHP
GGVKGKGLLTKLTKAKVEIVKADVPKPWAIPDFIVNEARRGHLDMDHDAVNALHQALGND
LRTLAAAVGQLASDSPNGRVGAEEVTTYFGGRAEISSFNVSDASLEGRLPDALETLRWAL
SIGVQPAAVTAAMARGLRSVGLYLDLRSQRMGDKQLAQTIGVSPWKLKSLNKQARSWSKA
GVARAIRLVNTCDAAVKGAAVDPDYALESMLIAIDEARQA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcagacttcactcgctcactggcgcggctaccgatcctgcggcatccttggacaggtg
aactcggtctatggcacggctttgttggtccagggtgcagaggccctgttgtcagacagg
gccgttgacgcccgtatcaaggccgcccgccgggagtttccggatgccgaactcgtcgag
ttggaaggtcgggaagtcgacgctgggcgattcgttgaggccaccggagggtcactgttt
agtcaagcgacgatcgtcgtcgtcaatgctgtgtctgatctcgacaaggatctgtttgac
cttgttgccaccactgcagctaatcctcctgacaccctgtgtctcatcttggtccatcca
ggcggggtcaaaggtaaagggttgctgaccaaactcacgaaagccaaggtggagatcgtc
aaggccgatgtccctaaaccatgggcaatcccggacttcatcgtaaatgaggcacgtcga
ggccacctcgacatggaccacgacgccgttaatgctctgcaccaggctctcggcaacgat
ttgcgcactctggcagcagctgtcggtcagctcgcgagcgattccccgaatgggcgagtt
ggagctgaggaggtcacgacctatttcggtgggagggcggagatctcgtcttttaatgtt
tccgacgccagcttagaaggacggctccctgatgcgttggagaccttacgctgggccttg
tcgatcggggtgcaaccggctgcggtgaccgctgcgatggcacgcggactgcggtcggtg
ggtctctacctggatctgcgaagccagcggatgggggataagcaactcgcccaaactatt
ggcgtatcgccatggaaactcaagtccctcaacaagcaggctcggtcgtggagcaaagct
ggcgttgcaagagctatccggctcgtcaacacgtgcgatgctgccgtcaaaggggctgct
gttgaccccgattatgccttggaatcgatgcttatcgctatcgacgaggctcgccaagcc
tga
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