KEGG   Cutibacterium acnes SK137: HMPREF0675_4290
Entry
HMPREF0675_4290   CDS       T01215                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pak  Cutibacterium acnes SK137
Pathway
pak00010  Glycolysis / Gluconeogenesis
pak00020  Citrate cycle (TCA cycle)
pak00260  Glycine, serine and threonine metabolism
pak00280  Valine, leucine and isoleucine degradation
pak00310  Lysine degradation
pak00380  Tryptophan metabolism
pak00620  Pyruvate metabolism
pak00630  Glyoxylate and dicarboxylate metabolism
pak00640  Propanoate metabolism
pak00670  One carbon pool by folate
pak00785  Lipoic acid metabolism
pak01100  Metabolic pathways
pak01110  Biosynthesis of secondary metabolites
pak01120  Microbial metabolism in diverse environments
pak01200  Carbon metabolism
pak01210  2-Oxocarboxylic acid metabolism
pak01240  Biosynthesis of cofactors
Module
pak_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pak_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pak_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pak_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pak00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HMPREF0675_4290 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HMPREF0675_4290 (lpdA)
   00620 Pyruvate metabolism
    HMPREF0675_4290 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HMPREF0675_4290 (lpdA)
   00640 Propanoate metabolism
    HMPREF0675_4290 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HMPREF0675_4290 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HMPREF0675_4290 (lpdA)
   00310 Lysine degradation
    HMPREF0675_4290 (lpdA)
   00380 Tryptophan metabolism
    HMPREF0675_4290 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HMPREF0675_4290 (lpdA)
   00670 One carbon pool by folate
    HMPREF0675_4290 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pak04147]
    HMPREF0675_4290 (lpdA)
Enzymes [BR:pak01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HMPREF0675_4290 (lpdA)
Exosome [BR:pak04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HMPREF0675_4290 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored GIDA HI0933_like FAD_binding_3 NAD_binding_8 DAO Thi4 3HCDH_N AlaDh_PNT_C ApbA Amino_oxidase 2-Hacid_dh_C Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: ADE00101
LinkDB
Position
1337240..1338643
AA seq 467 aa
MSSHFDVVVLGAGPGGYVAAIRAAQLGKKTAIIETEYWGGVCLNVGCIPTKSLLRNAELA
HIVTKEAKTFGIGGDITVDFGKAFSRSREVSARMVKGIHFLMKKNKITEFNGWGEFTGPK
AISVKDSDGKVTDEITFDNAIIAVGSVVKTLPGTQLSGRVVTYKEQILSDTVPGSIVIAG
SGAIGTEFAYVLANYGCDVTIVEFLDRMVPNEDKEVSAELAKAYKKLGIKVLTSTKVDSI
DDSGDKVKVTISPSKGGESKVIEADRVLQAVGFAPRVEGYGLEKTGVKLTERGAIEIDDF
MRTNVDGIYAIGDCTAKLMLAHTAETQGVVAAETIAGAQTMPINYDMIPRATYCQPQVGS
FGYSEDQAREKGYDVKVSKFPFAANGKAWGLGDGTGFVKIVADARHGELLGASLVGHDVS
ELLPELTLAQLWDITAEEIGRNIHAHPSLSEALKDAAEGVEGHMINF
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagctcacattttgacgtcgttgtccttggagccggccccggtggctatgttgccgcc
attcgtgccgcccagctcggtaagaagaccgccatcatcgagacggagtattggggtggt
gtttgcctcaatgttggttgcatccccaccaagtcacttttgcgcaacgcagaactagcc
cacatcgtcaccaaggaggccaagaccttcggtattggcggggacatcaccgtcgacttc
ggcaaagccttcagtcgttcccgcgaagtgtctgcccgcatggtcaagggcatccacttc
ctcatgaagaagaacaaaatcaccgagttcaacggctggggggagttcaccggccccaag
gccatctctgttaaagactctgacggcaaggtgaccgacgagatcactttcgacaacgcg
atcatcgcagtcggttcggtcgtcaagactctgccaggcacccagctctccggtcgggtc
gtcacctacaaggaacagatcctttccgacaccgtccctggatccatcgtcatcgccggt
tctggagccatcggtactgagttcgcctatgtgctggctaattacggctgtgacgtgacc
atcgttgaatttctcgatcgtatggtcccgaacgaggacaaggaggtctcggccgagctg
gctaaggcctacaagaaactcggcattaaggtgctgacttccactaaggtcgattccatc
gacgactccggtgacaaggtcaaggtcaccatctcgccgtcgaagggtggggagtccaag
gtcattgaagccgaccgcgttttgcaagccgtcggattcgctccgcgggttgagggctac
ggcctggagaagaccggcgtgaagctcaccgagcgtggcgccatcgagatcgacgacttt
atgcgcaccaacgttgacggcatctacgccattggcgactgtaccgccaagctcatgctg
gcccataccgccgagactcaaggcgtcgtcgccgccgagacaattgctggggcacagacc
atgcccatcaactacgacatgattccgcgcgctacctactgtcagccgcaggttggttct
ttcggttactcggaggaccaggcccgggaaaagggctacgacgtcaaggtgtccaaattc
ccgttcgccgccaatggcaaggcgtggggtctgggcgatggcaccggcttcgtgaagatc
gtcgccgacgcccgtcacggcgagcttctcggtgcctcgctagtcggccatgacgtctcc
gagttgctccccgaactaaccttggcacagctgtgggacatcaccgctgaggagatcggc
cgcaacatccacgcgcacccgtcgctgtcggaagctctcaaggatgctgcggaaggcgtc
gagggacacatgatcaacttctga

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