Cutibacterium acnes SK137: HMPREF0675_4355
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Entry
HMPREF0675_4355 CDS
T01215
Name
(GenBank) putative exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HMPREF0675_4355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_4355
Enzymes [BR:
pak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HMPREF0675_4355
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HMPREF0675_4355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecC_C
Exonuc_V_gamma
Motif
Other DBs
NCBI-ProteinID:
ADD99539
LinkDB
All DBs
Position
1400063..1403212
Genome browser
AA seq
1049 aa
AA seq
DB search
MAGVVKVVHSWRCVSDAVVAALSEPTADPFVRPILVAPGNAQSRSLLQSLARRHGIAAGI
DTTTPLGLRERLEEDLLGIKRENDPWQPGPLALRICRIIENNSPGFEVVSAHLEASRRQG
VPRATWTTARQAADAICALARDSHDVLNAWADGAAPTSHQGDTDLAGDPLDPARAWWAPL
WRTLLAKPCHVPDPVSRHQLLVDAILTQSRSEPPIVWFSSTTTAQHDVSLAEALSASHDV
TIVHLDHGIGGADPWRTFDRARSATTARWTSSSIRTAQSAVTHRKELPTVEIHQCHGVDR
QAEVVRDVVCAALADYPTLELRDIVVICCGRQDTARLLSAGTLADIDHPAHQLRFTTPPQ
REHVNPVTEAVTTILGLASSRATGQDLLSLCAMPAVRTRFGFSDDDQEAIERLVSQADIR
WGVDPAARDKAGLGRIRQSTWLAGIERMLLAIAMSSTPPTYLGTVTPITDVGSTTIPLVG
KLAELVSRMRKAFLDTETPAPIATWKRRVSQIVDNLTAAPADAPRSALQTLALLTGLEGV
AEDREFDRQEIIDLLNWLSGIHRGRHSWFDGSIQVCRPGELTPVDHEVVIVVDPDQEAVH
ADLLQGLRDENLDPAAKARQDLLDVALSARTFLVVVRQARSPVSNLTVLRGPFTRTLSQA
LEAQSATPRCVKHGLQPFSADEFSHHSDTAWSGFDNAAAAAAGCHPGSQPRPHRVVLPPV
AKLPESRMSLIDLTLALSHPARTLLRARAGAPANERSTDLPVDLPLAPSSLDKYWIRSRI
LADLEHGSLLDDAINAERLRGSTPPGHLGQHIVTKLAEDAMQICQRANQLRGDQDEQFIE
IDFDLDEGDSPPLLWPDELIVDPMHPVHLRGRVGVRNHQIVHAVASRANARPLLDLWVDL
LAVTVATDEPGWFGALVPNGDVLGMASPAPDHARDILAGLARVAWWSNQQLIPLPVKLAH
ALVELSPIAHNDYRTGASALQVQWSRERDPNWAAFLGTDVGELIACCHELGTTLKELSEW
LFDPIKQALRGAGSSPSTMAQFSNSGRRA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgtggtgaaggtcgtccattcctggcgctgcgtcagtgacgccgtcgtagca
gctttgtcggagcccaccgccgatccattcgtccggccgattctggttgctcctggcaat
gctcagtctcgatctttgctgcaatccctcgcccgccgtcatggaatcgcagccggtatc
gatacaacaacgccgctgggtctacgagaacgactcgaggaagatctcctgggaatcaag
cgggaaaacgatccgtggcagcccgggcccctggccctgcgtatatgccgcatcattgag
aacaattcccccggttttgaggttgtttcagcccatctggaagccagccgtcggcaagga
gtgccgcgtgcaacatggacaactgcacgacaagctgcagacgcgatctgcgcgctagct
cgcgactctcacgacgtcttgaatgcctgggccgacggtgccgcccccacatctcaccag
ggcgatactgaccttgcgggtgacccgctggaccccgcccgcgcgtggtgggccccgctg
tggcgtaccctccttgccaaaccgtgccatgttccggaccccgtgagccgacaccagctc
ctcgtcgacgcgatactcactcagtcacgatctgaaccgccgatcgtgtggttttcatcg
acgaccacggctcagcacgacgtcagcttggcggaagcgttgtcggcctcacacgacgtc
accatcgtccatctcgatcatggcattggtggtgcggatccgtggcggacctttgaccgg
gcacgctctgccacgaccgcgcgatggacatcgtcatcgatccgtactgcgcagagcgcg
gttacccaccgcaaagagctgccaacagtcgaaatacaccaatgccacggagttgatcgt
caggccgaagtagtacgtgatgttgtatgcgccgctctcgccgactacccaaccttggaa
ctcagggacatcgtcgtcatatgttgcgggcgccaggacaccgcccgccttctttccgct
gggactttggcagatatcgatcaccccgcacaccagttgcggttcacgacccctccgcaa
cgcgagcatgttaatcccgtcactgaagcggtaacgaccatcttgggcctggcctcctca
cgtgccacgggacaagacttactcagtctgtgcgccatgcctgcggtgcggactcgattc
ggattctccgatgacgaccaggaggcgattgaacggctggtgagccaggccgatatccgg
tggggagttgaccctgccgcaagggacaaggcagggctgggccgaatcagacaatcgacc
tggctggctggcatcgaaaggatgcttctcgccatcgcgatgtcgtctacaccaccaact
tatctggggacagttacgccgattactgacgtcggatcgacaacaatccccctcgtcggg
aaactcgctgaactcgtatcccgaatgcgcaaggcgttcctcgacactgaaacacctgca
ccgattgccacctggaaacgccgggtcagccagatcgttgacaatcttactgccgctccc
gcagacgctcctcgatcggcgctacagactcttgccctgctgacaggtctggaaggggtc
gcagaagacagagagtttgatcgccaggagatcattgacctcctcaactggctctcaggc
atccatcgtgggcggcacagctggttcgatggatcaattcaggtgtgtcgtccgggtgag
cttacccccgtcgaccacgaagtcgtgattgtcgtcgaccctgaccaagaagctgttcat
gccgatctccttcaaggcttgcgagatgaaaacctcgatccggctgctaaagcacgacag
gaccttctcgacgtcgctctgtcagccagaaccttcctggtcgtcgtgaggcaggcgcgt
agccctgtgagcaacctcaccgtgctgcggggcccctttacgagaaccctctcccaagct
ctcgaggcgcagtccgcaacaccacgttgcgttaaacacggtttgcaaccattctctgcc
gatgaattctctcatcacagtgataccgcttggagtggattcgacaacgccgcggccgca
gcggcagggtgtcatcctggatcacagcctcgaccccatcgcgtcgtattgcccccggta
gccaagttgcctgaatcccggatgtcccttatcgacctcactctcgccctgtctcacccg
gcacggacgctgttgcgagcccgtgctggtgcaccagctaatgaaagatctactgacctt
ccggtcgacctgccactggcaccaagctcattagacaaatactggatacgttcccggatc
ctggctgacctggaacacggttctctgctagacgacgccatcaatgccgaacggctccgc
ggctctactcctccagggcacctgggccagcacatcgtcaccaaattggctgaagacgcg
atgcagatttgtcagagggccaatcagctccgtggcgaccaagacgagcagttcatcgaa
attgacttcgatctcgatgagggtgacagccccccattgctatggcctgacgaactcatt
gtcgatcccatgcacccagttcacctgcgtggtcgagtcggtgtgaggaaccatcagatt
gtccacgctgtcgcgtcccgggcgaatgctagaccgctcctcgacctgtgggtcgatctg
ctcgctgtgaccgtcgccactgacgaacccggatggtttggagcccttgtcccgaacggc
gacgtcctggggatggcttccccagcaccggatcatgctcgcgacatcctggctgggctc
gcccgagtcgcctggtggagcaaccagcaactcatcccgttgcctgtgaaattggcacac
gcgctcgtcgagttgtcccccatagcgcataacgactatcgcaccggagccagcgccctc
caagtgcagtggtcgcgagagcgggatccaaactgggcggcatttttgggaaccgatgtg
ggtgagctcatcgcctgctgccatgagttaggtaccaccttgaaggaactttccgaatgg
cttttcgatccgattaagcaggcattgagaggagctgggtcttcaccctcgacgatggca
cagttttcgaattcggggaggagagcatga
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