Cutibacterium acnes SK137: HMPREF0675_4534
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Entry
HMPREF0675_4534 CDS
T01215
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0675_4534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pak03019
]
HMPREF0675_4534
Messenger RNA biogenesis [BR:
pak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0675_4534
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ADD99590
LinkDB
All DBs
Position
complement(1569681..1571372)
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AA seq
563 aa
AA seq
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MAETGLMTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDL
LLPGLDYLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLRE
HRIKGYKLNVVHESDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQL
PLDGRITDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVA
CFASHVHRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYR
DNEVVIISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLT
KLGAAVVHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVD
ENNVVLVEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSV
VTVVDTRSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQVVRR
TIGRWVSRSLRRRPMIVPVVVKI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagactggactgatgacacctccggacctgcaaccggacgttttgcgcatcatc
cccctcggaggcttgggggatgttgggcgcaacatgtcgtgctatgaaatcaacggggag
atgctcgtcattgactgcggggtgctcttcccagaggacgaccatcccggggttgattta
ctgcttcccgggctggactacctcgacgaggagaagctggccaaggtgaaggctctggtg
ctcacacatggccacgaggatcatattggtgcggtgccgtacctgcttaaacgtcgcccc
gatatcccgatctacggctctaagctgaccctggcgctggtcgaggcgaaactgcgtgaa
caccgcattaagggctacaaactcaatgttgttcacgagagcgatgtcgctgaggttggc
gagcagtttgacctggaatttatcgccgttaaccactccattcctgacgctctggcagtg
tgtgtgcgcaccgatgccggaactctcattaacaccggcgacttcaagatggaccagctt
ccgctagacggacgcatcaccgatctgcgtgccttcgcgcgactcggtgaggagggggtc
gatctgttcatggttgactccacgaatgccgaggttccggggttcgtgaagtccgagact
gagatcgagcctgctatcgagagggtcttcgagaaggcgaaaaagaagcttattgtggct
tgcttcgcctcccatgtgcatcgcgtccagcaagtgctcaatatggccgtgcgtcatcac
cgcaaggtttgctacgtcggtcgttcaatggtccgcaatatggctgttgctcaggacctg
ggctacctcgacgtgccggagaacaccgtcatcgagctgcgcgacctcgaccactaccga
gataacgaggtcgtcatcatctccactgggtcccaaggtgagccactttcggccctagca
aggatcgccaaccgagagcaccgagacatcgaggtgggggagggagataccgttttgctg
gcatcctctctcatcccgggtaatgagaatgccgtctatcgagtgattaatggcctgacg
aagcttggcgccgccgtggtacataagggcaacgctttggtccacgtttccggccatgcc
gcagccggagagctgctgtacgcgtataacatcgtgcggccacgcgctgtgatgccgatt
catggtgaggtgcgtcatcttgtcgctaatgccgatctggccaaagcaaccggtgtcgat
gagaacaacgtggtgcttgtcgaggacggcggggttattgaccttgttgacggagtaccg
cgagttgttggcaaggtcgatgcctcgtacatccttgttgacggatctggggtgggggag
cttaccgaggacacgctcactgatcgccgtatcctcggtgaggagggattcttgtcagtc
gtcaccgtggtcgacacccgctcggcgtcagtggtgtctcgcccggcgatccaggcgcgt
ggttttgccgagggcgactcggtcttcgcggagatcaccgaccagatcgtcaccgagcta
gagaaggcgatggccggtggtatggacgatacccaccggttgcaacaggtggttcgtcgg
accattggtcggtgggtatcgcggtctctgcggcgtcgacctatgatcgtgcctgtcgtc
gtcaaaatctga
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