Cutibacterium acnes SK137: HMPREF0675_4538
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Entry
HMPREF0675_4538 CDS
T01215
Symbol
gpsI
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0675_4538 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pak03019
]
HMPREF0675_4538 (gpsI)
03016 Transfer RNA biogenesis [BR:
pak03016
]
HMPREF0675_4538 (gpsI)
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF0675_4538 (gpsI)
Messenger RNA biogenesis [BR:
pak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF0675_4538 (gpsI)
Transfer RNA biogenesis [BR:
pak03016
]
Prokaryotic type
tRNA degradation factors
HMPREF0675_4538 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
S1_RRP5
KH_PNO1_2nd
PCB_OB
KH_KhpA-B
KH_2
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
ADE00358
LinkDB
All DBs
Position
complement(1575397..1577598)
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AA seq
733 aa
AA seq
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MEGPGLEFTEAIIDNGKLGKHVVRFEAGLLAQQADGSAAVYLDGDTMLLSATTAAKTPRD
SIDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEGAILACRLIDRPLRPSFVKGLRNEVQ
VVVTVMALNPAVYYDVVAINAASMSTQLAGLPFSGPIGGVRMALIDDQWVCFPSVDQRKE
STFDMVVAGRVLADGDVAIMMVEAESTPATWGLVRGGRTAPTEEVVATGLEAAKPFIKVL
CDAQVALAVKLPKETYDFPVFKDYEDDVYAAVEEKAADELSRIEQIAAKLERQEAESELK
ARIKAELAETFPEREAEISGAFKAVMKKIVRKRVLDEGVRIDGRGPRDIRSLSAEVGIIP
RVHGSALFQRGETQILGVSTLNMLDMEQKLDTLSPENTRRYMHNYNMPPYSTGETGRVGS
PKRREIGHGNLAERALIPVLPTREEFPYAIREVSEAIGSNGSTSMGSVCASTLALLNAGV
PLRASVAGIAMGLMSETDEDGKTKYLALTDILGAEDALGDMDFKVAGTSEFVTALQLDTK
LDGIPADVLAGALKQAKEARTAILEVMNEAIDSPDEMAPTAPRIITVHIPVDKIGEVIGP
KGKMINQIQDDTGANISIEDDGTIFIGADNGDSAESARSMINAIANPQMPEVGERYLGTV
VKTTSFGAFVSLLPGKDGLLHISKMRDLNDGKRVEAVEDVLSVGQKIQVEIAEVDDRGKL
SLVLASDEDDADE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggagggacctggactcgagttcaccgaggccattatcgataacggcaagcttggtaag
catgtcgtccgttttgaggcgggactgctggctcagcaggcggatggatccgccgccgtc
taccttgatggtgacactatgctgctgtcggccactacggccgctaaaactcctcgcgat
tccatcgactttttcccgctgacggtcgacgtcgaggagcgcatgtatgccgccgggcgt
atccccggctcctttttccgccgtgagggacgtccgtccgagggtgccatcctcgcctgc
cgcctcattgaccgcccgctgcgtccgtccttcgttaagggactgcgtaacgaggtccag
gtcgtcgtcactgtcatggctctcaacccggccgtttactacgacgtcgtcgccatcaat
gccgcctcgatgtccacccagcttgctggtctgcccttctccgggccgattggtggcgtc
cggatggctctcatcgacgaccagtgggtgtgcttcccttccgtcgatcagcgtaaggag
tcgaccttcgatatggtcgtcgctggtcgtgtgctagccgacggcgacgttgccatcatg
atggttgaggcagagtcgaccccggctacttggggcctcgtgcgcggcgggcgcaccgct
ccgacggaggaagtcgtcgctaccggtctggaggccgccaagcctttcatcaaggtgctg
tgtgacgctcaggtcgctctggctgtcaagctgcctaaggagacctacgacttcccggtt
ttcaaggactacgaggatgacgtctacgctgccgtcgaggagaaggctgctgacgagctc
tcccgcatcgagcagattgctgcgaagttggagcgtcaggaggctgagtccgagctcaag
gcccgcatcaaggccgagctcgctgagacgttcccggaacgcgaggctgagatttccgga
gcgttcaaggccgtcatgaaaaagatcgtccgcaagcgcgtccttgacgagggcgtgcga
atcgacggtcgtggaccgcgtgatatccgctccctgtcggctgaggtcggcattattccg
cgggtccacggttcagccctgttccagcgcggcgagacccagattctgggcgtgtcgact
ctcaacatgctcgatatggagcaaaagcttgacaccctctccccggaaaacacccggcgg
tacatgcacaactacaacatgccgccgtactccaccggtgaaaccggccgtgttggttcc
ccgaagcgtcgcgagattggtcacggtaacctcgccgagcgggccctcattccggtgttg
ccgacccgcgaggagttcccctacgccatccgcgaggtttccgaggctattggctctaat
ggttcgacctcgatggggtcggtttgcgcctccaccctcgccttgctcaatgccggtgtg
ccgctgcgcgcctcggtcgctggaatcgccatgggcctcatgagcgagactgacgaggac
ggcaagaccaagtacctggctctcaccgacatcctcggtgctgaggacgccctcggcgac
atggactttaaggtggccggtactagcgagttcgtcactgcactgcagctggacaccaag
ctcgacgggatccctgccgacgtgctcgccggtgctctcaagcaggctaaggaggctcgc
accgcgatccttgaggtgatgaacgaggccatcgattctcccgatgaaatggccccgact
gctccgcgcatcattaccgttcacatcccagtggacaagatcggtgaggtcatcggcccc
aagggcaagatgattaaccagattcaggacgacactggcgccaatatctctattgaggac
gatggcacgattttcatcggggctgataacggagattcggccgagtctgcccgttcgatg
attaacgcgatcgctaacccacagatgcccgaggtcggtgagcgttacctcggcaccgtc
gtcaagacgacgagctttggcgctttcgtctctttgctgcccggcaaggatggtctgttg
cacatctccaagatgcgtgaccttaacgacggtaaacgcgtcgaggccgtcgaggacgtg
ctgtcggtcggtcagaagatccaggtggagatcgccgaggtcgatgaccgtggcaagctc
tccttggtgctggcttccgacgaagacgacgctgatgagtga
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