Cutibacterium acnes SK137: HMPREF0675_4656
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Entry
HMPREF0675_4656 CDS
T01215
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF0675_4656 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pak01007
]
HMPREF0675_4656 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pak03016
]
HMPREF0675_4656 (lysS)
Enzymes [BR:
pak01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HMPREF0675_4656 (lysS)
Amino acid related enzymes [BR:
pak01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF0675_4656 (lysS)
Transfer RNA biogenesis [BR:
pak03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HMPREF0675_4656 (lysS)
Prokaryotic type
Other AARSs
HMPREF0675_4656 (lysS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
LPG_synthase_C
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ADD99203
LinkDB
All DBs
Position
complement(1709644..1712889)
Genome browser
AA seq
1081 aa
AA seq
DB search
MNIAALLIVLRLVFSRTTWVAIANNVFSLFIFPVDGFGWAGVVVLLVLSDALSRRKRFAW
WVSLVVFGLMWLVAAAFFIIVVTEVFIGWPTDTLNDVDLAGYLFNVFSVGWILVALLTHR
RDFAAHTVRANLGRAVVVLVGGLLATGFIGWLLVSLTGGVGRPRNRLVHIITRILQGSGA
GIAQEPTSPHWVQGVVSFLLAVVLVAALVVILRSQRNIAMMSLSDELRLRRLLDENPADS
LGYFALRRDKAVVFSRNGHAAVCYRTEAGVALASGDPVGPVDQWPGAIDAFLEVAHTYGW
VPAVVGTSEEGATTWNQAGLRAMRIGDEAIISPATFNLDDPDLKPVRHTVTKLRAMGYTT
RVRRHEDINPQELHSLIDLTDKWRQNGDERGFSMALSRLGDPLDGRCVMVEAIYPDDGPR
AGQTAGILSFTPWGNDGLSLDVMRRDLDGADNGVTELMVAGLMAAGPEIGIRRVSMNFAV
FREAIEEGARVGASPVRRLNRWLVLVASKWFQIEQLYRSNVKYKPSWQTRYLNFTDTSDL
AQVGLAMGIAEGQLDIPNWLYPVEPPPQPIYSISGHPEIAEFLAEERAPILPQRRLPEQV
RTRMATRERLIESGVEAYPPDCKPDHRLGDVAVELTGQEMTVSGRVDACRDHGGVIFVDL
FDWTGACQLVMERDTMGVDSLRDFRHAVSLGDHLVATGTVGASRNGTLSLEMTSWRLAAK
SLRPLPSRRSGFNDPEAKVRQRYLDLIVNPSARDQLRARSNAIRAVRETLLSHDYIEVET
PILQTIHGGANARPFHTHINAYDLDLYLRIAPELYLKRLMVGGAGRVFEIGRNFRNEGAD
ATHNPEFTMLEAYQAYGDYVQMRHLTREMILSAARNATGGTVVRGRDRKGVEHEIDLANE
WHVITVNEGISRGLGEEVTADTPKETLIGYANKLGIATLPKWSRGDVVLELHEHLSEHVT
VEPTFFCDFPTDVSPLTRQHRDDPRLAEKWDLIIFGSEVGTAYTELVDPVIQRERFTAQS
LLAAGGDPEAMELDEDFLEALEYAMPPSGGMGMGLDRLVMMLTNASIRETISFPLVRPRT
L
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccgccctactcatcgtgttacgcctggtgtttagccgcaccacgtgggtg
gctatcgccaacaacgtgttctcgttgttcattttcccggttgacggtttcggttgggcc
ggtgtcgtggtcctgttggtgctgtcggacgcgctgtcgcgacgtaaaaggttcgcctgg
tgggtgagcctcgtcgtgtttgggttgatgtggctggtggcggccgcgttctttatcatc
gtggtcaccgaggttttcataggttggccgacagacacccttaacgacgttgatctggcg
gggtatctgttcaacgtgttttcggttggctggatcttggtggcattgttgactcatcgt
cgcgactttgctgcgcacacggttcgcgccaatctcggacgagcggtcgtcgtactcgtt
ggcggtctgttggctaccggatttattgggtggctattggtgtccctgaccggtggtgtt
ggacggccacggaaccgcctggtgcacatcattactcgcatccttcaaggtagtggagca
ggtatcgcccaggagccgacgtcgccgcactgggtgcaaggtgtggtctcattcctgctg
gccgtcgtgctggtggctgcgctcgtcgtcattttgcgttcccaacgcaatatcgcgatg
atgagcctgtctgacgagctgagattacgccgccttcttgacgaaaatccggctgattcg
ctgggatattttgccctgcgccgtgacaaggctgtcgtcttttctcgcaacggtcatgcc
gccgtctgttatcgcacggaggctggggtggcgttggcgtcgggtgacccagttggcccg
gttgaccagtggcccggagccattgacgcatttcttgaggtcgcccacacctatggatgg
gttcctgccgtcgttggcacctcagaggaaggtgcgacgacatggaaccaggccggtttg
agggcgatgcgcatcggcgacgaagccatcatctccccggctacgtttaatctcgatgat
cctgatctcaagccggtgcgccatacggtcacgaaactgcgcgcgatgggatacacgact
cgggttcgacgccatgaggacatcaatccgcaggagttgcacagcctgattgacctgact
gataaatggcgtcaaaacggcgacgagcgcggcttctcaatggcgttgtctcggttgggg
gaccctctagatggtcgatgtgtcatggtggaggcgatctaccccgacgacggccctcgc
gctggtcagacggccggtattctgtcctttacaccatggggtaatgacggcttgtccctc
gacgtcatgaggcgagatctcgacggagcagataacggtgtgactgaacttatggtcgcc
ggactcatggcggccgggccagaaattggcattcggcgggtgtccatgaatttcgcggtg
ttccgcgaggctattgaggaaggcgctcgagtgggtgcttccccggtgcgtcggcttaac
cgctggttggtactggtggcatcgaagtggtttcagattgagcagttgtaccgttccaac
gtcaagtacaagccgagctggcagacccgctaccttaatttcactgacacctctgatctg
gctcaggttggtctagcaatgggtattgctgagggtcagctcgatattcctaattggctt
tacccggtggaaccgccgccccagccgatatattcaattagcgggcatccagagattgcc
gaattcctggctgaagaacgcgcgccaattcttccgcagcgtcgtcttcccgaacaggtt
cgtactcgaatggcgacccgtgagcgtcttattgagtcgggggtggaggcctatccgcct
gactgtaagcctgaccaccggctgggtgacgtcgccgtcgagctgactggccaggagatg
accgtttccggacgggtggatgcctgccgtgaccacggcggggtcatcttcgttgacctc
ttcgactggacaggtgcctgccagctagtcatggaacgtgacaccatgggcgtcgacagt
ctgcgcgacttccgtcatgcggtgtctttgggagatcacctcgttgcgactggaacagtt
ggggcatcccgtaacgggacgctaagtctggagatgacgtcgtggcggctagcagcgaag
tcgttgcgaccgctgccatcgagaagatcgggattcaatgacccagaggccaaggttcgt
cagcgttatctcgacctcatcgtcaaccccagtgcgcgcgatcagctgcgtgctcgctcg
aatgccatccgcgcggtgcgagaaaccctgctaagtcacgactacatcgaggttgagacg
ccgattctgcagacgatccacggcggggcgaatgcgcgtccattccacacccacatcaac
gcctacgacctggacctttatctgcgcattgccccagagctgtacctcaagaggcttatg
gtcggcggggcgggacgagttttcgagattggtaggaacttccgcaacgagggtgccgac
gctacccataatcccgaattcacgatgctcgaggcctaccaggcctatggcgattacgtc
cagatgcgtcacctcacgagggagatgatcctgtccgcagcccgcaacgccaccggtggg
acggtcgtgcgcggacgtgaccgcaagggtgttgagcatgagatcgatttggctaacgaa
tggcatgtcatcactgtcaacgagggaatctcgcgcggtttgggggaggaagttactgcc
gatacccccaaagagacgctcatcgggtacgccaataagctcgggattgcgactttgccg
aagtggagtcgaggcgatgtcgtcctggagttgcacgagcacttgagtgagcatgtcacc
gtcgaaccgaccttcttctgcgacttcccgaccgacgtctccccgctgacacgacagcac
cgcgatgacccgcgactggccgagaaatgggatctcatcatcttcggctccgaggtgggt
actgcctatacggaactcgtcgatccggtgatccaacgggagcggtttacagcccagtcc
ttgctcgctgcgggtggcgatccggaggcgatggagcttgatgaggacttcctggaggct
ctcgagtacgcgatgccgccttctggcggtatgggcatggggctggatcgtctggtcatg
atgctgacgaatgcgtcaattcgcgagacgattagcttcccgctggtgcgtccgcgcacc
ttgtga
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