Cutibacterium acnes SK137: HMPREF0675_4881
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Entry
HMPREF0675_4881 CDS
T01215
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0675_4881 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pak03021
]
HMPREF0675_4881 (rpoA)
03400 DNA repair and recombination proteins [BR:
pak03400
]
HMPREF0675_4881 (rpoA)
Enzymes [BR:
pak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0675_4881 (rpoA)
Transcription machinery [BR:
pak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0675_4881 (rpoA)
DNA repair and recombination proteins [BR:
pak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0675_4881 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADD99713
LinkDB
All DBs
Position
complement(1943930..1944946)
Genome browser
AA seq
338 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSKFVIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ
HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKSGAGEVTAADINPPAGVTIHN
PELHIATLNDDGRFEMELIVERGRGYVSSALNDDPNAEIGRIAVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKPSILPRDAIASAGKTLVELFGLTRELNAEAEGIEIGSGPVD
EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK
LTELGLALKDSAPGFDPLAAAEAYDEANDDDYAETEQY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcattgcacagcgccccactctcactgaagagtccatctccgaattccgctcgaag
ttcgtcatcgagcctctggagccgggtttcggatacaccattggcaactcgctgcgtcgc
accctgctgtcgtccatcccgggcgcctctgtgacgagcatcaagatcgagggagtccag
cacgagttctcgactattgagggctgtgtcgaggacgtcaccgagatcattctgaacctc
aagggccttgtgctctcctcggaggaagacgagccggtcgccatgtatctgcggaagtcc
ggtgccggcgaggtcaccgctgccgacattaacccgcctgccggtgtgaccatccacaac
ccggagttgcacatcgcaaccctcaacgacgatggccgcttcgagatggaacttattgtc
gagcgtggccgcggctacgtctctagcgccctcaacgacgatccgaatgccgagatcgga
cgcatcgccgtcgactcgatctactccccggttctcaaggtcacctacaaggttgaggcc
acccgagtcgagcagcgcacggacttcgacaagctcgttgttgacgtcgaaaccaagccg
tccatcctccctcgcgacgccattgcctccgctggcaagaccctcgttgagctgttcggg
ctgactcgcgagctcaacgctgaagctgagggcattgagatcggttccggaccagtcgac
gaggagtacgccgagagcctgggcaccccggtcgaggagctcaacctcaccgtccgttcc
tacaactgcctcaagcgtgagggcatccatactgttggagaactcgtctcgcggtctgag
caggacctgctggccatccgtaactttggatccaagtcgatcgatgaagtcaaggaaaag
ctcaccgagcttggcctagccctcaaagactcggctccggggtttgacccacttgccgca
gctgaggcctacgacgaggccaatgacgacgattacgcggagactgagcagtactga
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