Cutibacterium acnes SK137: HMPREF0675_5310
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Entry
HMPREF0675_5310 CDS
T01215
Name
(GenBank) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pak
Cutibacterium acnes SK137
Pathway
pak00061
Fatty acid biosynthesis
pak01100
Metabolic pathways
pak01212
Fatty acid metabolism
pak02024
Quorum sensing
pak04146
Peroxisome
Module
pak_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pak00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HMPREF0675_5310
00071 Fatty acid degradation
HMPREF0675_5310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HMPREF0675_5310
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0675_5310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pak01004
]
HMPREF0675_5310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pak04147
]
HMPREF0675_5310
Enzymes [BR:
pak01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HMPREF0675_5310
Lipid biosynthesis proteins [BR:
pak01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HMPREF0675_5310
Exosome [BR:
pak04147
]
Exosomal proteins
Exosomal proteins of breast milk
HMPREF0675_5310
Exosomal proteins of breast cancer cells
HMPREF0675_5310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADE00275
LinkDB
All DBs
Position
complement(2352551..2354485)
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AA seq
644 aa
AA seq
DB search
MAASTHQPGRAELDPAGELLGKPVPGENFIESHLAHMFRATVANHGFRPATRVRQGGQWI
IRTYAETGRRVAGLARAFVTPGLLTEDGLQRGDRISLFAGNCPEWIEADLAGMTIGVIPV
PIYPTSTPDQIVHIVTDAGVRVIITAGPKELDRILEARDQMPGLETVILINPADQVGDHD
GLTVLSLEQVRQAGVSEEIQTVVEERMGQSCPDDVAALIYTSGTTGEPKGVMISHRAALA
ELQALDAFFDVTPADHSLSFLPLSHALEWGWSMAVIRHGCLNTFVPNPKTISAMLAEVRP
TLFVSVPKLYEQVMSVAREKVSDSPVKLKIFEWSIRIGREWWQAEQEGRRPSVSLRARHG
VADRLVLKAIRDAIGGPKTVLAAGGAPLRKEVEEFFAACGLFVCQGYGLTEASPLVSFNS
PGGYKFGTAGRPLVGSQMTTTEDGEILYRGPNVMKGYWKAPEATAAAIEDGWLHTGDIGH
IDEDGFLVITDRLKDIIVTLNGKNISPQPIENSLMKDPLFEHAVLLGDNRPCLTLLVKPS
LPQVEELAERLHITSMTGPEMLRSEELAEEIRRRVAEITEKLPHQEQIRDLRVLWDEFTT
DNGLLTPTLKVRRREVEKRFTEIVEEMYARLAARRRAGKRDSKH
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgagcacacatcagcccggtagagctgaacttgacccggccggggagcttctc
ggtaaacctgtaccgggggagaacttcattgagagccacctcgcccacatgttccgcgcc
acggttgccaaccacgggttccgtcccgcgactcgggttcgtcagggcggtcagtggatt
atccgcacctatgcggagactgggcgtcgcgtagccgggctcgcccgggcctttgtcact
cccgggctgctcaccgaggatggcctgcagcgcggggatcgtatttctctgttcgccggt
aattgcccggagtggatcgaggctgatctcgcgggcatgacgattggcgtgatcccggtg
ccgatttacccgacgtcgacccctgatcagattgttcacatcgtcactgatgctggggtg
cgtgtcatcatcacggctggtcccaaggagctcgaccgtattctcgaggcccgcgatcag
atgcccggccttgagacggtgatcctgataaatccggcagatcaggttggtgatcatgac
ggtttgacggtgctgtccctggaacaggtgcgtcaggctggggtttcggaggagatacag
acggtcgtcgaggagcgcatggggcagtcatgccccgacgatgttgccgcgttgatttac
acctcgggaaccacgggtgagcccaagggggtcatgatcagccatcgggccgcgttggct
gagctgcaggcacttgacgccttcttcgacgtcaccccagctgatcactcgctgagcttc
ctgccgctctcgcacgccctggagtggggatggtcgatggcggtgattcgacatggttgc
ctcaataccttcgtgcccaacccgaaaacgatctcggcaatgttggctgaggtccgccca
acccttttcgtctcagtgccgaaactgtacgaacaagtcatgagcgtggcccgtgagaag
gtttctgattctccggtcaagctcaaaatctttgagtggtcaatacggattggccgcgag
tggtggcaagccgagcaggagggacggcgccccagcgtatctttgcgagcgcgtcatggg
gttgccgatcgtctcgtcctcaaggccatccgtgacgccatcggtggacccaagactgtg
cttgcggccggcggagctccactgcgcaaagaggtcgaagagttcttcgccgcctgcggg
ctgtttgtgtgccagggatacgggctgacagaggcctccccgctggtgagcttcaactct
ccaggcggatacaagttcggcactgctggcaggccgctagtgggtagtcagatgacaacg
actgaggacggggagattctctaccgtggtcccaacgtcatgaaaggatattggaaggcc
cctgaggccactgccgcagcaatcgaagatggctggttgcacactggggatattgggcac
atcgacgaagatggttttctcgtcattaccgatcgcctcaaagacatcatcgtcaccctt
aacggcaagaatatttcgcctcagccgatcgagaattcgctcatgaaggaccccctcttc
gaacacgcggtgctgctgggcgataaccgtccgtgcctgactctgctcgttaagccgtcg
ctgcctcaggtagaagagttggccgagaggttgcatatcacctcaatgacgggcccggaa
atgctgcgttccgaggagctagcggaggaaattcgtcgccgggtggccgagatcaccgag
aaattgcctcatcaagagcagattcgtgatctgcgagtgttgtgggacgagttcaccaca
gacaacggactgctcactccaaccctcaaggtacgccgacgtgaggtggagaagagattc
accgagatcgttgaagagatgtacgcgcggcttgcggcccgacgaagggctggtaaaaga
gactccaagcactga
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