Photorhabdus akhurstii: B0X70_02310
Help
Entry
B0X70_02310 CDS
T07392
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh00730
Thiamine metabolism
pakh01100
Metabolic pathways
pakh01240
Biosynthesis of cofactors
Module
pakh_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
B0X70_02310
Enzymes [BR:
pakh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
B0X70_02310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QXF32139
LinkDB
All DBs
Position
complement(518000..519937)
Genome browser
AA seq
645 aa
AA seq
DB search
MSHNTFIPTTDISPKPNPARPRKAQRDAAQEFINSIQGVTFPNSRRIYLQGSRDDIQVPM
REIQLSPTLIGGTKEEPQYEENEAIPVYDTSGAYGDPDAKLDVHVGLTKLRQPWIDERQD
TEPVAALGSDFTQQRLADAGLDHLRFNHRPHPLKAHEGKCVTQLHYARKGIITPEMEFIA
LRENMGRERIHGDVLRQQHAGQSFGAQLPENITPEFVRQEVAAGRAIIPANINHPESEPM
IIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGRYIHETREWILRN
SPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK
RLTGIVSRGGSIMAKWCLSHHQENFLYQHFHEICEICAAYDVSLSLGDGLRPGSIQDAND
EAQFAELHTLGELTKIAWEYDVQVMIEGPGHIPMQMIRRNITEELEHCHEAPFYTLGPLT
TDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIAAHAADL
AKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPDTARAYHDETLPQASGKIAHFCSMCGP
KFCSMKISQEVRDYAAGMEQMSEAFRAHGGELYHSVEDVSHEQSA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctcataatacttttatccctacaaccgatatttcaccaaaacccaatccggcacgc
ccgcgtaaagctcaacgcgatgccgctcaggaatttattaattctattcagggcgtgacg
ttcccaaattcacgacgaatttatcttcaaggttcccgtgacgatatccaagttccaatg
cgcgaaattcagttatcgcccacgttaattggcggaaccaaagaagagcctcagtatgag
gaaaatgaagccattccggtttatgatacttccggcgcttatggcgatcctgatgccaaa
ctggatgtacatgtagggttaaccaagctacgccaaccgtggatcgatgaacgccaagat
actgaacctgttgccgccctcggctccgattttactcagcaacgcctggcggatgccggt
ctcgatcatttacgtttcaatcatcgcccccatccattaaaagcccatgaaggcaaatgc
gttactcaactgcactatgcccgcaaaggcatcatcacaccggaaatggaatttatcgca
ctgcgggaaaatatggggcgcgaacgtatccacggtgatgtgctacgccaacaacatgct
ggacaaagttttggcgctcagttgccggaaaatatcacaccagaatttgtccgtcaggaa
gtcgcagccggtcgggctattattcctgccaatattaatcaccctgaatcagaaccgatg
attattggccgcaattttctggttaaggttaacgctaatatcggtaattcttccgtcacc
tcttctattgaggaagaagtagaaaagttaatctggtctactcgctggggcgcagatacg
gtcatggatctctccacaggccgttatatccacgaaacccgcgaatggatcttacgtaat
agcccggtacctatcggcacagtccctatttatcaggcgctggagaaagtcaatggcgtc
gcggaaaatctcacctgggaaatgttccgtgataccttgctggaacaagcggaacaagga
gttgattacttcaccattcatgccggtgtattactgcgctatgtaccgatgacagccaaa
cgcctcaccgggattgtctcccgcggtggttcaattatggcgaaatggtgtctgtctcat
catcaagaaaacttcctctaccaacatttccatgaaatttgtgaaatctgcgccgcttat
gatgtttccctatcattgggagacggtctgcgccccggttctattcaggatgctaatgat
gaagcgcagtttgcagaactgcacacattaggtgaactgaccaaaattgcctgggaatat
gatgttcaggtgatgatagaaggtcctgggcatattcctatgcagatgatccgccgcaat
ataacggaagaattagagcattgtcacgaagcccctttctatactcttggcccactgaca
acagatattgcaccgggttatgaccattttacttccggtatcggcgcagccatgattggc
tggtttggctgcgccatgctctgttatgtgacgccaaaagagcatctcggtttgccaaac
aaagacgatgttaaacaagggctgattacctacaaaatcgctgctcatgccgccgatctc
gccaaaggtcatcccggcgcacaaatccgcgataacgcgatgtccaaagcacgttttgaa
tttcgttgggaagatcaatttaatctggcgctcgatcccgatactgctcgcgcctatcac
gatgaaactttgccacaagcgtccggaaaaattgcgcatttctgttctatgtgtggacct
aaattctgctctatgaagatttctcaggaagtacgcgattacgccgcaggtatggaacag
atgtctgaagcattccgcgcccacggtggcgagttgtatcacagcgtagaggatgtatcc
catgaacaatctgcctaa
DBGET
integrated database retrieval system
