Photorhabdus akhurstii: B0X70_03650
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Entry
B0X70_03650 CDS
T07392
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B0X70_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pakh03400
]
B0X70_03650
Enzymes [BR:
pakh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B0X70_03650
DNA repair and recombination proteins [BR:
pakh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B0X70_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
VMAP-M0
PSD13_N
Motif
Other DBs
NCBI-ProteinID:
QXF32354
UniProt:
A0ABX8LP34
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All DBs
Position
832601..836023
Genome browser
AA seq
1140 aa
AA seq
DB search
MFKVYHSNQLDLLKELIAILIGDNPLTDPFAQEVILVQSPGMSQWLQIQLAERIGISANI
SFPLPATFIWDMFTKVLPDIPKESAFSKDAMTWKLMALLPQLLPEAEFVALRHYLDQDFD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQQGQLIDGLSDNQLWQKRLWLELTKYTHQLQ
QPQWHRANLYQRFISTLENSPELGNSLELKNSTELSACLPKRVFICGISALPPVYLQALQ
ALARHIDIHLMFTNPCKYYWGDIQNYAFLAKLSSRKPRHYKNEQVLEHFKDPGNAQSLFN
DDGEQEVSNPLLASWGRLGRDNLYLLSQLEQSSDVHAFVELEQDNLLHQLQRDILYLEDH
AQIGSTKETFENSLRKRVLDPLDCSLSFHVCHSPQREVEVLQDQLLRLLEDNPSLTPRDI
IVMVADIDNYTPYVQAVFGNVSAERYIPFAISDRKARQAHSVLQVFITLLDLPQSRFTTE
QVLALLEVPALANKFDIHEDGLRLLRRWVEESGVRWGLDDDNVEELSLPVTGQHTWRFGL
TRMLLGYAMDSRSGPWKEVLPYDESSGLAAELAGQLAELLMQLSYWRKILGESRTLTGWL
PICQELLETFFASDSETELVLAMIEQQWQKVIVNGLNARYQENVPLVLLQDELALQFDNE
KISQRFLAGSVNFCTLMPMRSIPFKVVCLLGMNDGIYPRSIPPLGFDLMAEKGQRGDRKR
RDDDRYLFLEALISAEQFLYISYIGKSIRDDTECNPSVLVNELLDYVCQSFCLPGNEKLN
VDQSAIHVREHLLYLHSRVPFAPENFIPGSYQQSYAGEWLPAATEQGAAYAEFCQSIETA
QIQEITLDSLSSFYRHPVRFFFQRCLKVNFVIEETELPEEEPFVLDNFQRYQFNQLLLSA
LIEQQSPEPLFSRLRAAGGLPFGAFGEVYWLKQQKEMQPLADKIREQQMETLSIDLHHDL
GQMILTGQINKAQPDGLLRWRPASLTANDGMQLWIEHLAYCLAGGEGESRSYGRDGSEWR
FASVSSEQAKDYLNQLIEGYQRGISAPLPLFCKSGWAWLSTCVNKETGEIDDSNEIQSKA
ESQLLKAWLGDQGRTGEGDDPYIQRAFRQIDESFLAKLKQEALNYLLPMARNQKHRENIG
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaagtttatcattctaatcaattagatcttcttaaggaattgatagcaatattg
atcggggataatccactgactgatccatttgctcaggaagtcattttggtgcaaagcccg
ggtatgtcacagtggttgcaaatccaactggctgaaagaataggcatatcagccaatatt
tcatttccgcttcccgctacgtttatttgggatatgtttaccaaagtattgcctgatatt
cctaaagaaagtgcttttagtaaagatgctatgacatggaaattgatggcgttattgcct
caattattgccagaagcggagtttgtcgcgctcaggcactaccttgatcaagattttgat
aaacggaagattcatcaattggctgggcgggttgctgatctgtttgaccaatatctagtt
tatcgtccgcaatggttggaaagttggcaacaaggtcagcttattgatggtttgagcgat
aatcagttgtggcagaaaaggttatggctggaactgacgaaatatactcaccagttacaa
caaccccaatggcatcgtgctaatttgtatcagcgtttcatttcgacactggaaaatagc
cctgaactgggaaatagtcttgaactgaaaaatagtactgagctttcagcttgtttacca
aaacgagtatttatctgtggtatttctgccttaccaccggtctatttacaagctttgcag
gcattggcgcggcatattgatattcacctgatgtttaccaatccatgtaaatattattgg
ggggatattcagaattatgcttttctggcaaaactgagcagccgtaaaccacgtcattat
aagaacgaacaggtgctggaacattttaaagaccctggtaatgctcaatcactgtttaac
gatgatggtgaacaagaagtcagtaatcccttgttggcatcgtggggacggttgggtcgt
gataatctctatttattatcgcagcttgagcagagttcggatgttcacgcctttgttgaa
ttagaacaggataatctattacatcaattgcaaagggatattctctatctggaagatcat
gcccaaattggttcaacaaaagagacatttgaaaatagcctgcgaaaaagagtacttgat
ccgttggattgctctttgtctttccatgtttgccatagccctcaacgtgaagtggaagtt
ttacaggaccagttattgcgattattggaagataatccatcgttgacgccaagggatatt
attgtgatggtcgcggatattgacaattatactccctatgttcaggcagtatttggtaat
gtctctgctgaacgttatattccatttgctatttctgatcgtaaggctcgtcaggcacat
tcggttttacaggtatttattacactgcttgatttacctcaaagtcgttttacgacggaa
caggttttagcattgttggaagtacccgcgctggcgaataaatttgacattcatgaagat
ggtttgcgtttattaaggcgttgggttgaagagtcaggcgttcgttgggggctggatgac
gataatgtagaagaactatctttgccggtaacaggtcagcatacatggcgttttggactc
actcgaatgttattgggttatgcaatggatagtcggtctggcccttggaaagaggtattg
ccttatgatgaatccagcggtttagccgcagagcttgccggtcaattagctgaactttta
atgcaattgagctattggcgcaagattctgggcgagagccgaacattaacgggctggtta
cctatctgccaggagttgctggagacattttttgcatcagatagtgaaactgaattagta
ctggcgatgatagagcagcaatggcagaaagttatagtcaacggcttgaatgcccgttat
caagaaaatgtgccattggttctattacaagatgaattggcgcttcagtttgataatgaa
aaaatcagtcagcgttttctcgccggatctgtcaatttttgcactctaatgccgatgcgt
tctattccctttaaggttgtctgtttattgggaatgaatgatggtatctacccccgttca
attccaccgcttggatttgatctcatggcggaaaaaggtcagaggggggacagaaaacgg
cgggatgatgaccgttatctattccttgaagccttaatatctgccgaacagtttctctat
atcagctatattggtaagtccattcgtgatgatacggaatgtaacccttcggtgttggtg
aatgaattactggattatgtttgccaaagtttttgtttaccgggaaatgaaaaactgaat
gttgatcaaagtgctattcatgtcagagaacatctgttgtatcttcattcccgcgttcca
tttgcaccggaaaattttataccgggcagttatcagcaaagctatgccggggagtggtta
ccggcggcaactgagcaaggtgccgcatacgctgaattttgccaatctattgaaacggcg
caaattcaagaaattacacttgatagtttgagcagtttttaccgccatcccgttcggttt
tttttccaacgttgcttgaaagtcaatttcgttatcgaagaaacggaattaccagaggaa
gagcctttcgttttagataactttcaacgttatcagtttaatcagctattgttgagtgca
ctaattgaacagcaatcgcctgagccgcttttcagtcggcttcgtgctgctggcgggttg
ccttttggtgcttttggtgaggtttattggttgaagcaacaaaaagagatgcagcctctg
gcggataaaattcgtgaacaacagatggaaactttatctattgatttacatcatgattta
ggccaaatgattctgacaggacaaattaataaggcgcaaccggatggtttgctgcgttgg
cggccggccagcttaacagccaatgatggcatgcaattgtggattgagcatctggcttac
tgtcttgccgggggggagggtgaaagccgcagttatgggcgtgatggcagcgaatggcgt
tttgcttctgtgtcttcagaacaagcgaaagattatctgaatcaattgattgaaggttat
caacgaggaatatcagcgcctttaccactgttttgtaaaagtggttgggcgtggctttca
acatgtgtgaataaagaaacgggtgagattgatgatagcaatgaaattcaatcaaaagct
gaaagccagctattgaaggcatggcttggagatcagggacgcacaggcgaaggggatgat
ccttatattcagcgggctttcaggcaaatcgatgaatcatttttagcaaaacttaaacag
gaagcgctcaattatttgttaccgatggcgcgaaatcagaaacatagggagaatatcgga
taa
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