KEGG   Photorhabdus akhurstii: B0X70_04175
Entry
B0X70_04175       CDS       T07392                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pakh  Photorhabdus akhurstii
Pathway
pakh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pakh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B0X70_04175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pakh03021]
    B0X70_04175
Transcription machinery [BR:pakh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B0X70_04175
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_7 HTH_23 GerE HTH_24 HTH_28 TnsD Sigma70_ECF MarR HTH_Tnp_4 HTH_VMAP-M9 HTH_40 HTH_11 HTH_Mga DUF722 DUF2774
Other DBs
NCBI-ProteinID: QXF32437
UniProt: A0ABX8LQ58
LinkDB
Position
complement(953432..953941)
AA seq 169 aa
MKMTVNVSDTQQIQCMYIHNHDWLFRWLKHRLNCDETAADLTQDTFVKLLRSPLPQQLNE
PRAYIVTIAKGLMVNWYRRRSLEQSYLDLLVSLPEPLIPAPEQKLIILETLQEIDIMLNQ
LPTPVQTVFLLSQIEGMKYEDIANQMNISLSTVKRYMKQGFYQCLIAMA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgaaaatgaccgttaatgtttcagacactcaacagatccagtgcatgtacatccacaat
catgattggctatttcgttggcttaagcatcgtcttaactgtgatgaaaccgccgcagac
ctgacccaagatacttttgttaaattacttcgttcacctttaccacagcaacttaatgaa
ccccgtgcctacatcgtcaccattgccaaagggttgatggttaactggtaccgccgccgc
tcacttgaacaatcttatctggatttactcgtcagtctgcctgaaccgctcattcccgca
ccagagcaaaaacttatcatcctcgaaacgcttcaggaaattgatatcatgctgaatcaa
ctccccacgccagtgcaaactgtctttttactttcccagatagaaggaatgaagtatgaa
gatattgcaaatcagatgaatatttcgctgtccacagtaaaacgttatatgaaacaaggc
ttttatcaatgcctgatagcaatggcataa

DBGET integrated database retrieval system