Photorhabdus akhurstii: B0X70_04175
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Entry
B0X70_04175 CDS
T07392
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B0X70_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pakh03021
]
B0X70_04175
Transcription machinery [BR:
pakh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B0X70_04175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_7
HTH_23
GerE
HTH_24
HTH_28
TnsD
Sigma70_ECF
MarR
HTH_Tnp_4
HTH_VMAP-M9
HTH_40
HTH_11
HTH_Mga
DUF722
DUF2774
Motif
Other DBs
NCBI-ProteinID:
QXF32437
UniProt:
A0ABX8LQ58
LinkDB
All DBs
Position
complement(953432..953941)
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AA seq
169 aa
AA seq
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MKMTVNVSDTQQIQCMYIHNHDWLFRWLKHRLNCDETAADLTQDTFVKLLRSPLPQQLNE
PRAYIVTIAKGLMVNWYRRRSLEQSYLDLLVSLPEPLIPAPEQKLIILETLQEIDIMLNQ
LPTPVQTVFLLSQIEGMKYEDIANQMNISLSTVKRYMKQGFYQCLIAMA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaccgttaatgtttcagacactcaacagatccagtgcatgtacatccacaat
catgattggctatttcgttggcttaagcatcgtcttaactgtgatgaaaccgccgcagac
ctgacccaagatacttttgttaaattacttcgttcacctttaccacagcaacttaatgaa
ccccgtgcctacatcgtcaccattgccaaagggttgatggttaactggtaccgccgccgc
tcacttgaacaatcttatctggatttactcgtcagtctgcctgaaccgctcattcccgca
ccagagcaaaaacttatcatcctcgaaacgcttcaggaaattgatatcatgctgaatcaa
ctccccacgccagtgcaaactgtctttttactttcccagatagaaggaatgaagtatgaa
gatattgcaaatcagatgaatatttcgctgtccacagtaaaacgttatatgaaacaaggc
ttttatcaatgcctgatagcaatggcataa
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integrated database retrieval system