Photorhabdus akhurstii: B0X70_07870
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Entry
B0X70_07870 CDS
T07392
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X70_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pakh03019
]
B0X70_07870
Enzymes [BR:
pakh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0X70_07870
Messenger RNA biogenesis [BR:
pakh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0X70_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
AAA_22
P-loop_SecA
UTP25_NTPase-like
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QXF33053
UniProt:
A0ABX8LV87
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All DBs
Position
1788352..1789638
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AA seq
428 aa
AA seq
DB search
MNFESLGLSADILRAIEEQGYSAPTPIQQQAIPVVLAGKDLLASAQTGTGKTAGFTLPML
QRLNDSSIQVKGRRPVRALILTPTRELAAQVGENVRDYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSRVEILILDEADRMLDMGFIHDIRRVLNKLPPK
RQNLLFSATFSDDIKNLANKLLHDPVSVEVARRNSASEQIEQFVHFVDKKRKGELLSFLI
GSRNWQQVLVFTRTKHGANRLAEQLNKDGVTAAAIHGNKSQGARTRALADFKAGRIRVLV
ATDIAARGLDIDQLPYVVNFELPNVAEDYVHRIGRTGRADATGQALSLVCVDEHKLLKDI
ERLLKREIPRMAIPGYEPDPTIKAEPIQNGRQARGDNRQKNSHRRSGAPSRQRSRNHDGS
HKSPSARG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaatcacttggcttaagtgctgatattttgcgtgccattgaagaacaaggt
tattcggcgccaacgccaatccaacagcaggcaatccctgtcgtattagcaggtaaagat
ttattagcgagtgctcaaacaggcacgggtaaaaccgcaggttttaccttacccatgctg
caacggttaaatgattcttctattcaggtgaaagggcgccgaccggtcagagcattaatc
ctgacgccaacccgtgaattggctgctcaagtgggggaaaatgtacgtgattacagtaaa
tacctcagattgcgctctctggttgtttttggcggtgttagcattaatcctcagatgatg
aaattgcgtggtggtgtggatattttggtcgccacgccggggcgtttactggatcttgaa
catcagaatgcagttgatttatcgcgggtagagattctgatattggatgaagctgaccgt
atgctggatatgggatttattcatgacatccgccgagtgctgaataaattaccgccgaaa
cggcaaaatttgctgttttctgcaactttctctgacgatatcaaaaatttagccaataag
ttactgcatgatcctgttagtgttgaggttgcacgtcgtaattctgcttctgaacagatt
gaacagtttgttcactttgttgataaaaagcgtaaaggcgagctgctctctttcttgatc
ggcagccgtaactggcagcaagttctggtgtttacccgaaccaagcatggcgcaaaccgt
ttggcggaacagttaaataaagatggtgtaacggctgctgctattcatggtaacaaaagt
cagggggcgagaacccgtgcgttggctgattttaaagcgggccgcatcagggtattagtt
gcgacagatattgcagctcgtggtctggatattgatcaactgccttatgtagtgaatttt
gaattgcctaatgtcgccgaagattatgtccatcgtatcggtcgtactggtcgggcagac
gcaacagggcaggcactttctttggtctgtgttgatgagcacaaattgttgaaagatatt
gagcgtttgctaaaacgggagattcctcgtatggcgattcctggctatgagccagatcca
accatcaaggccgaacctattcagaatggccgtcaggcacgtggcgataatcggcagaaa
aatagccatcgccgttctggggcgccttcgcgtcagcgtagccgcaatcatgatggatct
cataaatcgccgagcgccagaggttaa
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