Photorhabdus akhurstii: B0X70_08950
Help
Entry
B0X70_08950 CDS
T07392
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pakh
Photorhabdus akhurstii
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pakh01002
]
B0X70_08950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pakh01011
]
B0X70_08950
Peptidases and inhibitors [BR:
pakh01002
]
Cysteine peptidases
Family C82
B0X70_08950
Peptidoglycan biosynthesis and degradation proteins [BR:
pakh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B0X70_08950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PgdA_N
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QXF33250
LinkDB
All DBs
Position
2043868..2045616
Genome browser
AA seq
582 aa
AA seq
DB search
MVKRAIKPLCISVICSTSIVAGYALANHQSRIIEGDMQNLPKMQVEKISETTIPEQVQIQ
TAAISETERRKIVRSWLPAQVKPVFFDQLVSLYSSNQMQPLWQDKIAVQRFEQQLSELAL
AGFQPQFGQWLTELNDAQLSQMGRDLILSDAMLGYLQFVSDVGQQGQSWLYRTMLYNSTT
PYKSITAYKIVLPSSEVVDQWQQAIIDHNVAAYVAALAPQHPQYENMRKEMMKQLADSKP
WPQLSDKSALKPGQSSSDVAVLREILIRLGMLSELTAQADHIYDPELVTAVKNFQRWQGL
APDGVIGKRTRDWLNTSPQTRAGLIALNIQRLRIIPSRVSTGIMVNIPDYSLHYYLNDQE
VLDSKVIVGRPSRKTPIMSSVLNNVVINPPWSVPTSLARKDIAPRGLDDPGYFQRGGYVI
FSNWRADASVIDPYTIDWSVITPANFPYRIWQAPGPTNSLGRYKFNMPNSEAIYLHDTPN
HNLFNKDIRAISSGCVRINKASELANMLLGDVGWTQNKVANTVKQGNTVYVNIPQRIPVY
LYYLTAWVDEQGIPQYRTDIYDYDNSVRQGSQFLSKLLPLQN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaagagcgataaagccactgtgtatttcggttatttgtagcacatcgatagta
gctggatatgctttagctaatcatcagagtaggattattgaaggtgatatgcaaaatctg
ccaaaaatgcaggttgaaaagatatctgagacaaccatacccgaacaggtacaaattcaa
actgctgcaatttcagaaacagagcgtcgtaaaatagtgcgaagctggttaccagcgcaa
gttaagcctgttttctttgaccaattggttagtttgtactcttccaatcagatgcaacct
ttgtggcaagataaaatcgcggttcaacgctttgaacaacaactttcagaactcgcattg
gctggctttcagccgcaatttggtcaatggctgactgaactcaatgatgctcaattgagt
cagatgggacgtgatctcatcttatcggatgctatgctaggttatttacaatttgtttca
gatgtcggtcagcagggccaaagctggctctatcgcactatgttatataacagcactaca
ccgtacaaaagcattacagcatacaaaattgtattaccttcatcagaagttgtggatcag
tggcagcaagctattatcgatcacaatgtggccgcttatgttgcagcattggcgccacaa
catcctcaatatgaaaatatgcgcaaggagatgatgaaacaactggctgatagtaaaccg
tggccacagctttctgataaaagtgcgctaaaaccgggacagagtagttctgatgtcgct
gtgttgagagaaatacttattcgccttgggatgttgagtgaactgacagctcaagcagat
catatctacgatcctgaattggtgactgcggtaaaaaatttccagcgttggcaagggttg
gcgccggatggcgtaattggtaaacgcacaagagattggctaaatacttcacctcaaact
agagcgggtttgatagcgcttaatatccagcgtttgcgtattatcccaagccgtgtgtct
acaggaattatggtcaatattccagattattcattgcattattatcttaatgatcaggaa
gtgttggactcgaaagtgatcgttggtcgtccaagccgtaaaacacccattatgagtagt
gtgctgaataatgtggtgattaatcctccctggagtgtgccgactagcctggcaagaaaa
gatatcgcgccacgagggcttgatgatcccggatattttcaacggggaggatacgttatc
ttttcaaattggcgtgctgatgccagtgtcatcgacccttacacgattgattggagtgtg
attacgcctgctaactttccttatcgaatatggcaagctccggggccgactaactcatta
ggccgctataaatttaatatgccaaactcggaggctatctatttgcatgatacgccgaac
cataacctgtttaacaaagacattcgggcgatcagctctggttgtgtacggattaacaag
gcttccgaattagcgaatatgttattgggagatgtggggtggactcaaaacaaggtggct
aataccgtgaaacagggcaataccgtttatgttaacattccacagcgtattcctgtttat
ttgtattatttaactgcttgggtagatgaacaggggattcctcagtaccgtaccgatatt
tatgattacgataatagtgtgagacaaggttcccagtttttgtcaaagttgttaccttta
caaaactaa
DBGET
integrated database retrieval system
