Photorhabdus akhurstii: B0X70_22310
Help
Entry
B0X70_22310 CDS
T07392
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh00071
Fatty acid degradation
pakh00280
Valine, leucine and isoleucine degradation
pakh00310
Lysine degradation
pakh00362
Benzoate degradation
pakh00380
Tryptophan metabolism
pakh00410
beta-Alanine metabolism
pakh00640
Propanoate metabolism
pakh00650
Butanoate metabolism
pakh00907
Pinene, camphor and geraniol degradation
pakh00930
Caprolactam degradation
pakh01100
Metabolic pathways
pakh01110
Biosynthesis of secondary metabolites
pakh01120
Microbial metabolism in diverse environments
pakh01200
Carbon metabolism
pakh01212
Fatty acid metabolism
Module
pakh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B0X70_22310
00650 Butanoate metabolism
B0X70_22310
09103 Lipid metabolism
00071 Fatty acid degradation
B0X70_22310
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
B0X70_22310
00310 Lysine degradation
B0X70_22310
00380 Tryptophan metabolism
B0X70_22310
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B0X70_22310
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
B0X70_22310
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B0X70_22310
00930 Caprolactam degradation
B0X70_22310
Enzymes [BR:
pakh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
B0X70_22310
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
B0X70_22310
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
B0X70_22310
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
B0X70_22310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QXF35618
LinkDB
All DBs
Position
5164587..5166773
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQSETIQVSWLKDGIAELVFNAPAAINKLDTKTVASLDKAVASLEQQTGLKGVLLRSE
KAAFIVGADITEFLSLFDSPVEKLQEWLNFSNSILNRIEDLPVPTISAINGYALGGGCEC
VLSTDFRVTSPDVRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEDALK
NGLIDAVVPKEKLVDSAVSMLEQAIAGNLDWKAARQPKLEPLKLNEIERSMSFSVAKGMV
MKVAGPHYPAPIAAVKSIEKAATLGRDEALKQETASFIPLAQTNVARALVGIFLNDQYVK
GLAKKHLKEVTTPEYAAVLGAGIMGGGIAYQSARKGMPVMMKDISQQALELGMSEAAKLL
NKQFERGRLDAIKMAKTLSSIQPTLNYAGIEQAQIVVEAVVENPKIKAAVLSETETLVNE
DCVLASNTSTIPISELANSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSEKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLLPYLLGFGLLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVIGLDTAHHAQSVMAQGFPDRMERDYKDAIDVLYDNQRYGQKNGLGFYKYTQDKKGKP
KKEQDEQTDQLLATICQQKSNFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGVFRYLETMGTAAYVKMAENYAHLGALYQVPPGLKAKAERNESYYPTAATI
AVSTGKTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagtgaaacaattcaagtaagctggctgaaagatggcattgctgaactg
gttttcaatgccccagccgcgattaataaactagataccaaaaccgttgcatctctcgat
aaggctgttgctagcctggagcaacaaactggactgaaaggcgttttattacgttctgaa
aaagctgcatttattgttggtgcagatattactgaattcctctctttattcgattcacct
gtagaaaaactgcaagaatggcttaacttttcaaatagcattttaaaccggatagaagat
ttacctgtaccaaccatttcggcaataaacggttatgctcttggtggtggttgtgaatgt
gttctatctacagatttccgtgtgacctccccggatgtacgcattgggctgccagaaacc
aaacttggtattatgcctggttttggtggctctgttcgccttccacgcttgatcgggact
gataatgctctagatatcattgcagcaggtaaagacattggtgcagaagatgcattgaaa
aacggtttgattgatgctgttgttcccaaagaaaaattggttgactccgcagtatcaatg
ctggaacaagcaattgcagggaaccttgactggaaagccgcacgccagccgaaattagag
cctttgaaactcaatgaaattgaacgaagcatgagttttagtgtggcaaaaggtatggtg
atgaaagtcgccggtcctcattatccagctcccatcgccgcagttaaatccatagaaaaa
gccgctacacttggtcgcgatgaagcgttgaaacaagaaaccgccagcttcattcctcta
gcacagacaaatgttgcccgtgccttagtgggcatttttcttaatgatcagtatgtaaaa
gggctggcaaaaaaacatctgaaagaagtcacaacacctgagtatgccgcagttctaggt
gcaggaattatgggtggtggtatagcctatcaatctgcccgcaaagggatgcctgtcatg
atgaaagacatcagccagcaagcccttgaattaggtatgagtgaagccgcgaaacttcta
aacaagcagtttgaacgtggccgtctagatgccataaaaatggcgaaaaccctctcttct
attcaacctaccttaaactatgccggtatcgaacaggctcaaatcgtggttgaagctgta
gtagagaatcctaagatcaaagcggctgtactatcagaaactgaaactctggttaatgaa
gattgtgtcctagcttccaatacatcaacaattccgatttcagaattggctaactcccta
aaacgcccggaaaacttctgtggtatgcatttcttcaacccggtacaccgcatgccgtta
gttgaagtaattcgcggtgaaaaaacgtctgaaaagacaatttcaaccgtagtcgcctat
gccagcaaaatgggtaaaactccgatcgtcgttaacgactgtccagggttctttgtaaac
cgggtactgcttccttatctccttggcttcggtctgctattgcgtgatggtggtgatttc
cgccaaatagacaaaatcatggagaaagaatttggttggccaatgggtcctgcctatctt
attgatgttattggtcttgatactgcacatcatgctcaatcagtcatggcccaagggttc
ccagatcgaatggagcgtgattataaagatgccattgatgttctatatgacaatcaacgt
tacgggcagaaaaacggccttggtttctacaagtacactcaagataagaaaggtaagcct
aaaaaagagcaggacgagcaaacagaccaactgctggcaactatctgccaacagaagagt
aatttctccggtgaagagatcattgctcgtactatgatcccgatgatcaacgaagttgtc
cgttgtctggaagaaggagtcattgccagcccggcagaagcagatatggctctggtttat
ggccttggtttccctccattccacggtggtgttttccgttatctggaaacaatgggaaca
gcagcttacgtaaaaatggctgaaaattatgctcacctcggtgctctttatcaggtacca
cctggtctgaaagccaaagctgaacgtaatgaaagttactatcctacagcagcaacgatt
gctgtcagcaccggaaaaacagcgtga
DBGET
integrated database retrieval system
