Photorhabdus akhurstii: B0X70_22770
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Entry
B0X70_22770 CDS
T07392
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X70_22770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pakh03019
]
B0X70_22770
03009 Ribosome biogenesis [BR:
pakh03009
]
B0X70_22770
Enzymes [BR:
pakh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0X70_22770
Messenger RNA biogenesis [BR:
pakh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0X70_22770
Ribosome biogenesis [BR:
pakh03009
]
Prokaryotic type
rRNA helicases
B0X70_22770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXF35703
UniProt:
A0ABX8M345
LinkDB
All DBs
Position
complement(5276315..5278216)
Genome browser
AA seq
633 aa
AA seq
DB search
MTTETEISFADLGLSAPILSALEDLGYEKPSPIQQQCIPHLLNGRDVLGMAQTGSGKTAA
FSLPLLHNINAELKAPQILVLAPTRELAVQVAEACADFSKHMRNVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEAIRRITRRFMNDPQEVRIQASVTTRPDISQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPNAELLSQRRLEKFAANVQQQLESSDLDQYRTLLSKLQPAEDLDIE
TLAAALLKMAQGERPLILPPDPARRPRREFNERDDRRRNGFDDRGERGDRPRRERRDVGE
MELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFATHSTIELPKGMPGDLLSHF
TRTRILNKPMNMQLLGDAQPFERRERRGGGRNGNGSGPRRDRESFNGGGRRFNGERRGGE
GRGEGQSRSNFRGRGDDHGSSAPRRRHNNSNAQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgagactgaaatctcttttgctgatctgggtttatcagcacctatcctttct
gcactggaagatcttggctatgaaaagccatctccaattcagcaacaatgtattccccat
ttattaaatggtcgtgacgtactaggtatggcgcagacggggagtggtaaaactgcggca
ttcagtctgcctttactgcataacatcaatgctgagttgaaagctccacagatccttgtg
ttggcgccgacccgtgaactggcggtacaggtagccgaagcgtgcgcagatttttccaaa
catatgcgtaacgtgaatgttgttgcgctgtatggtgggcaacgttatgacgttcagtta
cgcgctttgcgtcaagggccacaaattgttgtgggtacacctgggcgtcttttggatcat
ctgaaacgtggtacgttagatctatctaacctgagcggcttagttttggatgaagcagac
gaaatgctgcgtatgggctttatcgaagatgttgaaaacatcatgagccagatccccgca
gagcatcagactgcgctgttctctgcaactatgccagaagctatccgtcgcattactcgt
cgttttatgaacgatccgcaggaagtgcgtattcaagcgagtgtaacgactcgtcctgac
atcagccagagctattggtctgtttacggtatgcgtaaaaatgaagctttggtgcgtttc
cttgaagcagaggattttgatgccgcgattatttttgtgcgcaccaaaaacgcaacgctg
gaagtggcagaagcactggagcgtaatggctacaacagtgcggcgctaaacggtgatatg
aaccaggcactgcgtgagcagacattggaacgtctgaaagatggccgtttggatattttg
attgcaactgatgttgcagcgcgtggtctggatgttgagcgcatcagtctggttgttaac
tatgacattccaatggatgccgaatcttatgttcaccgtattggccgtactggtcgtgca
gggcgtgctggtcgagcgttgttgtttgtagaaaaccgtgaacgtcgcttgttacgtaac
gttgaacgtacaatgaagctgactatcccggaagttgaactgccaaatgctgaattgttg
agccagcgtcgtctggaaaaatttgccgctaatgtacagcagcaattggaaagcagtgat
ctggatcagtaccgtactctgttgtctaaattgcaacctgcggaagatctggatatagaa
acgctggccgcggcattattaaaaatggcgcaaggtgagcgtccattgattctgcctcca
gatccggcgcgtcgtcctcgccgtgaattcaatgaacgtgatgatcgtcgtcgtaatggt
tttgatgatcgtggcgaacgcggcgatcgtcctcgtcgtgaacgccgtgatgtcggtgaa
atggagttgtaccgtattgaagtgggccgtgatgatggtgttgaagttcgtcatatcgtt
ggtgcgattgctaacgaaggtgatatcagcagccgttatattggcaatatcaaattgttt
gcaacgcattccacaattgaattgccaaaaggtatgccaggtgatttattgtcccacttt
acccgtacccgcattctgaacaagccaatgaatatgcagttattgggtgatgcacagcca
tttgaacgtcgtgaacgtcgcggtggtgggcgtaacggtaatggtagtggccctcgccgt
gatcgtgagagttttaatggtggcggtcgtcgtttcaatggtgaacgccgcggtggagaa
ggtcgtggtgaaggccaaagccgtagcaatttccgtggtcgtggtgatgatcatggttca
tctgctccacgccgtcgtcataacaatagtaacgcacagtaa
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