Photorhabdus akhurstii: B0X70_22790
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Entry
B0X70_22790 CDS
T07392
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pakh
Photorhabdus akhurstii
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pakh03016
]
B0X70_22790
Enzymes [BR:
pakh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
B0X70_22790
Transfer RNA biogenesis [BR:
pakh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B0X70_22790
Prokaryotic type
B0X70_22790
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QXF35707
LinkDB
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Position
complement(5282167..5283114)
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AA seq
315 aa
AA seq
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MGRRRRGRDIHGVLLLDKPQDISSNDALQKVKRIFNASKAGHTGALDPLATGMLPVCLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGQIISERAILLNQAQLDAALDKFRGDTMQ
IPSMYSALKHQGKPLYEYARQGIEVEREARPITVYELQFIRWEDDELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPNDRMVTLEQLYELQKQAKDQEIPVGELIDSLL
LPMDSAIAHFPEVNLIPVVAAYFKQGQAVRSAKSPTLVESMVRITEGDERKFIGIAVIND
DGLVAPRRLVVESRD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtcgcggtcgtgatatacatggtgtgttgttactggataagccgcag
gatatttcttctaatgatgcgttacaaaaagtaaaacgtattttcaacgccagcaaagcg
ggtcacactggcgcgttggatccactggcaacgggtatgttaccggtttgccttggtgaa
gccacgaagttttcccagttcttacttgattctgacaaacgttatcgagtgatagctcgt
cttggtcagcgaactgacacatctgattcacatgggcaaatcatcagtgaaagggcaatc
ctgctaaatcaggctcaacttgatgcagctttggataaattccgtggggataccatgcaa
attccttccatgtattccgcactgaaacatcagggaaaaccgttgtatgagtatgctcgt
cagggtattgaagtagaacgcgaagcacgaccaattacagtctatgaattacagtttatc
cgttgggaagatgatgaactggaattggaaatacactgttcgaaaggaacttatattcgc
actattattgatgacttaggtgaattattaggctgtggtgctcatgttatttatttaaga
cgtttacaggtagcgaattatccaaatgatcgcatggtaacacttgagcaattatatgaa
ttgcaaaagcaggctaaagatcaggaaatacctgtgggtgaattaattgattcattacta
ttaccaatggatagtgcaattgctcatttcccagaggttaatttgattccagtagttgcg
gcttattttaaacaaggtcaggcggtacgcagtgccaaatcgccgactttggttgaaagt
atggtacgtataactgaaggtgatgaacggaaattcattggcattgctgttatcaatgac
gatgggcttgttgctccccgccgtttagttgttgaaagccgggattag
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