Photorhabdus akhurstii: B0X70_23420
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Entry
B0X70_23420 CDS
T07392
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03420
Nucleotide excision repair
pakh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B0X70_23420
03430 Mismatch repair
B0X70_23420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pakh03400
]
B0X70_23420
Enzymes [BR:
pakh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B0X70_23420
DNA repair and recombination proteins [BR:
pakh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B0X70_23420
MMR (mismatch excision repair)
Other MMR factors
B0X70_23420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXF35820
LinkDB
All DBs
Position
complement(5413365..5415536)
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AA seq
723 aa
AA seq
DB search
MVTMDVSYLLESLNDKQREAVAAPRTNMLVLAGAGSGKTRVLVHRIAWLLSVEKASPFSI
MAVTFTNKAAAEMRHRIENLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSE
DQHRLLKRIIKAMNLDDKQWPARQGMWYINGKKDEGLRPQHIESYGNPVEATWQKIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPQILQHYRGRFTNILVDEFQDTNSIQYAWIHLLA
GETGKVMIVGDDDQSIYGWRGAQVENIQRFLKDFSGAETIRLEQNYRSTSNILKVANTLI
ANNSDRLGKNLWTDGVEGEPISLYCAFNELDESRYVVSRIKNWLENGGALKNCAILYRSN
AQSRVLEEALLQASMPYRIYGGQRFFERQEIKDALAYLRLIANRHDDAAFERVVNTPTRG
IGDRTLDIVRQAARERQQTLWDCCQILLQEKVLAGRAAASLQRFIELIDALSTETEEMPL
HVQTDRIIRDSGLRAMYQQEKGEKAQARIENLEELVTATRQFSYQEEDEDLTPLQAFLSH
AALESGEGQADAYQDSVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSIEEGGRLEEERR
LAYVGLTRAMEKLTITYAESRRLYGKEVYHRPSRFIGELPSECIEEVRLRATVSRPVSHS
RLGTPISANDSGYALGQRVRHPKFGEGTIVNMEGSGEHSRLQIAFQGEGIKWLVAAYARL
EMV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtaactatggacgtctcctatctgctcgaaagtctgaatgacaaacaacgggaagct
gtagctgctccgcggaccaatatgttggtgttagctggcgcggggagtggaaaaacccgg
gtgttggtacaccgaattgcttggttgttgtcggtggagaaggcttcgccattttccatt
atggccgtgaccttcaccaataaagcggctgcggagatgcgccatcggattgaaaacttg
atcggcaccagtcaaggcggcatgtggattggtacattccacggtttggcccatcgtttg
ttacgagcgcatcatctggatgccaatttgccacaggattttcagattcttgacagcgaa
gatcaacatcgtctgcttaagcgcattatcaaagcgatgaatctggatgataaacaatgg
ccggctcgtcaaggcatgtggtacatcaatggtaaaaaagatgaaggattgcggccacaa
catattgaaagttatggcaatcctgttgaggcgacatggcagaaaatttatcaagcttac
caggaggcttgtgatcgggccgggttagtggattttgccgagcttttactgcgagcgcat
gagttgtggttgaataaacctcagatcctgcaacattaccgtggccgttttactaatatt
ctggtggatgagtttcaggacactaacagtattcaatatgcctggattcatctgttggca
ggggaaacaggcaaagtgatgattgtcggggatgatgatcaatctatttatggttggcgc
ggtgcgcaagttgagaatattcagcgtttcctgaaagatttttctggtgcggaaactatc
cgtttggagcaaaattaccgttccactagtaatattttgaaagttgccaatacattgatt
gccaataacagtgatcgcttgggtaaaaatctgtggactgatggcgtagagggtgaacca
atctccctttattgtgcattcaatgaactggatgaatcccgctatgtggttagccggata
aaaaactggcttgaaaatgggggcgctctgaaaaattgcgccatactttaccgcagcaac
gctcaatctcgtgtattggaagaggcgctgttacaggcatcaatgccgtaccgtatttat
ggtggtcaacgattctttgagcgtcaggaaattaaagatgcactggcttacttgcgtctg
atcgccaatcgccatgatgacgcggcgtttgaacgtgtagtgaatacgcccactcgtggt
attggtgacagaacgttagatattgtgcgccaggcggcgcgggagcggcagcaaaccttg
tgggactgttgccagatattgctgcaagagaaagtgctggccgggcgtgctgctgcttcc
ttacaacgttttattgaactgattgacgcgttatcgacagaaactgaagagatgccattg
catgttcagactgacaggattatccgtgattctggcctgcgagcgatgtatcaacaggag
aaaggtgaaaaagcgcaggcgcgtattgaaaaccttgaagaacttgttaccgcgactcgc
cagtttagctatcaggaagaggatgaagatttgacgccattgcaggcgtttctttcccat
gccgcgctggaatcgggagaaggtcaggctgatgcctatcaggattcagtgcaactaatg
acattgcattcggctaagggactggagttcccacaagtatttattgttggcatggaagaa
ggcatgttcccaagccagatgtcgattgaagagggtggacgtctggaagaggaacgtcgt
ttggcttatgtgggtctgacacgtgcaatggaaaagctgaccatcacttatgcagaaagc
cgccgtttatatggtaaagaggtttatcatcggccatctcgttttattggggaactgccg
tcagaatgtattgaagaagttcggttacgagcgacagtatctcgtccagttagccatagt
cggttgggcacgcctatcagtgccaatgatagcggttatgcccttggacaacgtgttcgt
caccctaaatttggtgaaggaaccattgtcaatatggaggggagtggtgaacatagccga
ttacaaatcgcgtttcaaggggaagggattaagtggctggttgctgcttatgccagactt
gaaatggtctga
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