Photorhabdus akhurstii: B0X70_23580
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Entry
B0X70_23580 CDS
T07392
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pakh
Photorhabdus akhurstii
Pathway
pakh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pakh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0X70_23580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pakh03019
]
B0X70_23580
Enzymes [BR:
pakh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0X70_23580
Messenger RNA biogenesis [BR:
pakh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0X70_23580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QXF35846
LinkDB
All DBs
Position
5445454..5446740
Genome browser
AA seq
428 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKT
LAFLASAFHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAENLAQVTGLKMGLAYG
GDGYDKQLKVLESGVDIVIGTTGRLIDYTKQGHINLNAVQVVILDEADRMYDLGFIKDIR
WLFRRMPPANERMNLLFSATLSYRVRELAFEQMNHAEYVEVEPLQKTGHRIREELFYPSN
EEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFSNGNIDVLVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIESYIQHAIPVSKYNSQALLQDLPAPKRRYRSRSGNHQRRNNLSHRNNTP
RNNRKRSG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacacacttgacagaaaagaagttttccgacttcgccttgcaccccaaggtt
atagaagctcttgataataagggtttttctaattgtacaccgatacaagcattgacattg
cctttcactgtcgaaggtcgtgatgtcgcggggcaagcgcaaaccggtacggggaagacg
ctagcatttttagcgtctgcttttcattatttactgactcatcccgcagcggaggagcgt
caaaccaatcagccaagagcgctgattatggctcctacccgcgaacttgctgtacagatt
tactcagatgcagaaaatctggcacaggtaacgggtttaaagatgggtcttgcctacggc
ggcgatggttacgacaagcagctaaaagtactggaatctggtgttgacattgttatcggc
actaccggacgtctgatcgactataccaaacaggggcacattaatctgaatgcggttcaa
gttgtgattcttgatgaagctgatcgcatgtacgatctcggttttatcaaagatatccgc
tggttattccgccggatgccaccagcaaacgaacgtatgaacctactgttttctgccacg
ctctcttaccgagtccgagaattggcatttgagcaaatgaatcatgcagagtatgtcgag
gtggaaccgctacagaaaacgggacaccgtatccgcgaagagctgttttatccttctaat
gaagaaaagatgcgcctgcttcaaacgttattggaagaagagtggcctgatcgctgcatc
attttcgccaatacaaaacatcgttgtgaagatatctgggcgcatctggctgctgacgga
catcgagttgggttactaaccggtgatgtagcacaaaaaaaacggttacgcattctagaa
gaattcagcaacggcaatattgatgttctagttgccactgatgtcgcagctcgtggatta
catattccgtcagtcactcacgtatttaattatgacttacccgatgattgtgaggattat
gtccaccgcattggccgtactggtcgtgcaggtgaaagcggccactcgatcagcctggcc
tgtgaagaatacgctctaaacctgccagcaattgaaagttatattcagcacgctatcccg
gtcagcaaatataacagtcaagccttgctgcaagacttaccggctcctaaacgccgctac
cgttcgcgttcaggaaaccatcagcgccgtaacaatttgtcgcatcgtaataatacacca
cgtaataaccgtaaacgttcaggctga
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