Candidatus Phytoplasma australiense: PA0155
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Entry
PA0155 CDS
T00752
Name
(GenBank) DEAD/DEAH box helicase-like
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pal
Candidatus Phytoplasma australiense
Pathway
pal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA0155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pal03019
]
PA0155
03009 Ribosome biogenesis [BR:
pal03009
]
PA0155
Enzymes [BR:
pal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA0155
Messenger RNA biogenesis [BR:
pal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA0155
Ribosome biogenesis [BR:
pal03009
]
Prokaryotic type
rRNA helicases
PA0155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Pro-kuma_activ
Cas3-like_C_2
PyrI
Motif
Other DBs
NCBI-ProteinID:
CAM11490
UniProt:
B1V958
LinkDB
All DBs
Position
complement(184816..186510)
Genome browser
AA seq
564 aa
AA seq
DB search
MNILFEQLPILEQTKKALQELNFIEATPIQALVIPEIIQGHDVIGQAQTGTGKTFAFGIP
IIEKIDYKLSKTQSLILCPTRELTLQVYEELKKLLRYYPQIRIAVVFGGESYTKQFRALE
SKPHLIIATPGRVIDHIERGKIDLSALKILTLDEADEMLKMGFQEALETILKQIPEERQT
VLFSATLPPSIKQIASKYQKNTKILQVPVKKLAVNAIEQYYFLVKEFDKNKLLVRLLDLK
RDYSTILFANTKKDVDEITSFLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATD
VAARGIDISDIKMVVNYDLPHEDEVYVHRIGRTGRAGKKGLAYSFISPRKFSQLKKLEYY
LKEKVKFLEIPSVEEIKKQILENFEQKVIDIIEKNSQENANNPMIEKLLQKFSSEQIIQG
LLTNIQPKAKNYTDIIPPRMTFTPRETFNNNSFGNRRFGEKRFQNPKFSSYNSYNSYNSY
NSYSQKRNDFIEATINLGKKDNINPTVLIRLLKDEYQIYGKNIGNIKHLTHETIFEIPSR
FWNQMKNKSDIRFQNKILVINKKE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttattcgaacaattacctattttagaacaaactaaaaaagctttgcaagag
cttaactttatcgaagcaacacccattcaagctttagtgatcccagaaattatccaagga
cacgatgtaattggacaagcgcaaacaggaacaggaaaaacttttgcctttggaatccct
attattgaaaaaattgattataaattatctaaaactcaaagtttaattttatgccctact
agagaattaactttgcaagtttatgaagagttgaaaaaattactacgttattacccgcaa
attagaattgcagttgtttttggtggtgaatcctacactaaacaatttagagctttagaa
agtaaaccacatttaattattgcaactccaggaagagtgattgaccacatagaaagaggc
aaaattgatttatcagcgttaaaaattttaactttagatgaagccgatgaaatgttaaaa
atgggatttcaagaagctttagaaactatattaaaacaaatcccagaagaaagacaaact
gttttattttctgccactcttcctccttccatcaaacaaattgcaagcaaataccaaaaa
aacactaaaattttacaagttcctgttaaaaaacttgccgttaacgcaattgaacaatat
tattttttagtcaaagaatttgataaaaacaagttattagttcgtttattagacttaaaa
agagattattcaaccattctatttgccaacaccaaaaaagacgtggatgaaattacttct
tttttacaagacaaagggtttttagctgatgctgttcacggagacttaaaacaaaatcaa
agacaatatgtcatgaataatttccgcaaaggaaaaataaaaatcttaatcgcaaccgat
gtggctgcaagagggattgatatttctgacatcaaaatggtagttaactatgatttacct
cacgaagatgaagtttatgtccacagaatcggaagaactggacgcgcaggcaaaaaaggt
ttggcttatagttttatcagtccaagaaaattcagtcaactcaaaaaattagaatattat
ttaaaagaaaaagtaaaattcttagaaattccttcagttgaagaaatcaaaaaacaaatt
ttggaaaactttgaacaaaaagtaatagatattattgaaaaaaatagccaagaaaacgct
aataatccaatgattgaaaaattattacaaaaattttcttctgaacaaatcattcaaggt
ttattaacaaacatccaaccaaaagcaaaaaattatacagatattatacctccaagaatg
acatttactccaagagaaacatttaataacaattcttttggtaatagaagatttggagaa
aaacgtttccagaatccaaaatttagctcctataattcttataattcctataattcttat
aattcctatagtcaaaaaagaaatgacttcattgaagcaacaattaaccttggtaaaaaa
gataatattaacccaactgttttgattcgattattaaaagatgagtaccaaatttatggt
aaaaacattggcaatatcaaacatttaacccatgaaactatttttgaaattccgagtcgt
ttttggaatcaaatgaaaaataaatcagacattcgcttccaaaacaaaattttagttatc
aataaaaaagaataa
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