KEGG   Candidatus Phytoplasma australiense: PA0541
Entry
PA0541            CDS       T00752                                 
Symbol
polC
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
pal  Candidatus Phytoplasma australiense
Pathway
pal03030  DNA replication
pal03430  Mismatch repair
pal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PA0541 (polC)
   03430 Mismatch repair
    PA0541 (polC)
   03440 Homologous recombination
    PA0541 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pal03032]
    PA0541 (polC)
   03400 DNA repair and recombination proteins [BR:pal03400]
    PA0541 (polC)
Enzymes [BR:pal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PA0541 (polC)
DNA replication proteins [BR:pal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PA0541 (polC)
DNA repair and recombination proteins [BR:pal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PA0541 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 DEDDh_C DNA_pol_A_exo1 HHH_3
Other DBs
NCBI-ProteinID: CAM11875
UniProt: B1VAA2
LinkDB
Position
543097..547689
AA seq 1530 aa
MMYNNAFQQFIKENGFDKNYFQNPQLEKVLVLESKNKLILHISFQKLLLVHDLETFLGQF
KIFLKEKEKEYLIKTILKEKQKDELTDKEKKELLDNYVKNEIEMEYRINFKNFDYLTSLF
PSYYRYIIPKAKIQKKYSDLDTFENDDFQIKCQNKKFIISVNPESFLTLNKKTKLLKEFF
YSFYRFENDFILEKDDKIKIKVGKDMTNTTNDKKNQNEEILKIRDIPKSPKELEEFGKNN
SQKTFIVEGLLAHTITESNFRKYNWKEFYFSCVIEENNGFSIEDRDAILIKAKVSKEKKA
EILNQNIQIHQKIQIEAEIKYSVWDDVHLLFDQNKINILGQSTLFPVRKDEFEGKKRIEF
HTHTKMSNLDAINSAKEYLKIAESWGHEAIAFTDHDGIYSYPEIYEYSKGKKIKPIYGLE
IDFIQERPIYITNQIEDNLTQDFNLKEATYVVFDLETTGFSSTKDKIIEIAGVKIKHGKK
IQEFQALINPQEKLSQTIINITNITDDMLEGKNTIDQVLPDFLNFIENCILVAHNATFDI
TFLKEKIKELGIAYKPQPVIDTMTLSQRFFSEFLKYFSLKRLATVFKVKMEEHHRALSDA
NTTAQVFIKMIDQLSDASKNDKNVLITNFFDLKDPIDPKYERSYHINILVANQKGYRNLF
ELLSAALTDGFYKKPRVLKSSLSKHREGLLVGSGCYDSNIFEIALNSNIEKLRKAISFYD
YIEIQPPQAYKHLISQLGDKGEKIIHSTLIKIIEETKKQNKIIIATGDVHYIHPWEKDYR
QIYIKAKQVGGGLHKLSKYGDCNLPNNHLLTTQEMLEAFNFLQNDYLSREIIIDNTHLLN
SKIEKIQPFTKELFSLKDDAFKDILNIPSIKKEIQSLVQKKVQKLYGPNPHPLIDKRLKQ
ELNSIIGDVNDATSNQDIAPIYYLSHLLVKKSLEDGYLVGSRGSIGSSLVATMLDITEVN
PLRPHYRCPNCCYTIIKTKPEEKEKYYSLEEQSYYDALGKVFSGYDLENKKCPKCQSPLE
KDGHDIPFETFLGFEGNKTPDIDLNFAGDYQIKAHNYIKNLIGEKHAFRAGTIQTIAKRN
AYGYVKGFVESANKNWRKQKISQITTKIEGVKRSTGQHPGGIVIVPPNRSIYEITPIQFP
ANDTNSEWKTTHFDYHSFENNLFKLDILGHDDPMMIKFLMDCVKKNPNKFAFKKAQEIPL
DDPEVYKLFSEDMKITSAQNETITIDSLGIPEFGTTFVKQMLKDIKKNHKKNINFADLVK
ISGLSHGTDVWLKNAKDVIGQTGDFEKYKNQNISFDDIIGCRDDIMLQLQDKGVDALKAF
EIMEFIRKGQPQNDPKTWQDYKNLMEGKVENWYIDSAEKIKYLFPKAHATAYVIMALRIA
WFKVYAPLIFYSGYFSKRAEQFDHQIMISNDPEIIQNKINNLKKNEIKAKEAVLINTLQI
AKEMLQRGFKFLSVDFNKSDIDVFKIENDNYLRMPLLCIDGLGMIAAKKIIKTREDKPFT
QEDFRTRSRVNKKIFEQIIKENLLESLPKE
NT seq 4593 nt   +upstreamnt  +downstreamnt
ttgatgtataacaacgcatttcaacaatttataaaagaaaatggttttgataaaaattat
tttcaaaatcctcaattagaaaaagttttggttttagaatccaaaaataaattgatttta
catatcagctttcaaaaattacttttagttcatgatttagaaacttttttaggtcaattc
aaaatttttctcaaagaaaaagaaaaagaatatctgataaaaacaattctcaaagaaaaa
caaaaagatgaactaacagacaaagaaaaaaaagaactgttggataattatgtaaaaaac
gaaattgagatggaatatcgcataaatttcaaaaattttgattatttaacatcccttttt
cctagttattatcgttatattattcccaaagcaaaaatccaaaaaaaatattctgatttg
gatacatttgaaaacgatgattttcaaattaaatgccaaaataaaaaatttataatttct
gtcaatcctgaatcttttttaactttaaataaaaaaacaaaacttttaaaagagtttttt
tactctttttatcgctttgaaaatgattttatcttagaaaaagatgacaaaattaaaata
aaagttggcaaagatatgacaaatacaacaaatgacaaaaaaaaccaaaatgaagaaatt
ttaaaaatacgagatattcctaaatctccaaaagaactcgaagaatttggaaaaaacaat
tctcaaaaaacttttatcgttgaaggtcttttggctcataccatcacagaaagtaatttt
cgtaaatacaattggaaagaattttattttagttgtgttatagaagaaaacaatggcttt
tcaattgaagatagagacgctattttaatcaaagccaaagtttccaaagaaaaaaaagca
gaaattttaaatcaaaatatccaaatacaccaaaaaattcaaatagaagcagaaattaaa
tacagcgtttgggatgatgtccatttgcttttcgaccaaaacaaaatcaatattttaggc
caatctactttgtttccggttagaaaagatgaatttgaaggcaaaaaaagaatagaattt
cacacacacacaaaaatgtctaatttagatgctattaatagtgctaaagagtatttgaaa
atagcagaatcatggggtcatgaagcaattgcttttaccgatcatgatggcatttattct
tatcctgaaatatatgaatattccaaaggaaaaaaaatcaaaccaatttatggattagaa
attgattttattcaagaaagacctatttatattactaatcaaatagaagataatttaact
caagattttaatttaaaagaagccacttatgttgttttcgacttagaaacaactggtttt
tcaagcacaaaagataaaattattgaaatcgctggggtcaaaattaaacatggtaaaaaa
atacaagaattccaagccttaattaatccccaagaaaaactaagccaaactattattaac
atcacaaacattacagatgatatgttggaaggaaaaaatacaattgaccaagttttgcct
gattttttaaattttattgaaaattgcattttagttgctcataatgcaacttttgatata
acttttttaaaagaaaaaataaaagaattagggatagcatacaaaccacaaccagtaatt
gatacgatgacattatcacaacgttttttcagtgaatttttaaaatatttttctttaaaa
agattagctacagtttttaaagtaaaaatggaagaacatcaccgtgctttaagtgatgca
aacacaaccgctcaagtttttattaagatgattgatcaattatcagatgctagtaaaaat
gacaaaaacgtattaattacaaatttttttgatttaaaagatcccattgatcctaaatac
gaaagatcttatcatatcaatattttagtagccaatcaaaagggttatcgaaatcttttt
gaacttttaagcgctgcattaacagatggtttttataaaaaacctagagttttaaaatct
agtttatccaaacatagagaaggtcttttggttggtagtggttgttatgatagtaatatt
tttgaaatagccttgaattccaacattgaaaaattaagaaaagcaatttctttttatgat
tatattgaaattcagccccctcaagcttacaaacacttaatttctcagttaggtgataag
ggagaaaaaatcattcactctactttaataaaaattatcgaagaaacaaagaaacaaaat
aaaatcatcattgctaccggagatgtccattatatacatccttgggaaaaagattatcgt
caaatttacattaaagcaaaacaagtaggaggcgggttgcataaattatctaaatatggt
gattgcaatttaccaaacaaccatcttttaaccactcaagaaatgcttgaggcgtttaac
tttttgcaaaatgactatttatcgcgtgaaattataattgataacactcatttgcttaat
tcaaaaatcgaaaaaattcaacctttcactaaagaacttttttctttaaaagatgatgct
tttaaagatattttaaatataccaagcatcaaaaaagaaatccaaagtttagtgcaaaaa
aaagttcaaaaattatatgggccaaaccctcatcctttgattgataaaagattaaaacaa
gaattaaacagtatcattggtgatgttaatgatgctacaagtaatcaagatatcgctcct
atttattatttatctcatttattggttaaaaaatctttagaagatggttatttggtaggt
tctcgtggctccatcggttcatctttggtggctaccatgttagatattaccgaagttaat
cctttaagaccgcattatcgttgccctaattgttgttatactattataaaaacaaaacca
gaagaaaaagaaaaatattattctttagaagaacaaagttattatgatgctttaggaaaa
gttttttcaggctatgatttagaaaataaaaaatgccccaaatgtcaatctccccttgaa
aaagacggtcatgatattccgtttgaaacgtttttagggtttgaaggaaataaaactcct
gatattgatcttaattttgcaggcgattaccagattaaagctcataattacattaaaaat
ttaatcggcgaaaaacatgcttttagagctggaacaattcaaacaattgcgaaaagaaat
gcttatggttatgtaaagggttttgttgaaagtgctaacaaaaattggcgtaaacaaaaa
atatcccaaataacaaccaaaattgaaggagtcaaacgttcaactggacaacatccagga
ggaatcgttattgttccgccgaatcgaagcatttatgaaataacaccaattcaatttccg
gccaatgataccaattctgaatggaaaacaactcattttgattatcattcctttgaaaat
aatttatttaaattagatattttaggccatgatgatcctatgatgattaaatttttaatg
gattgtgttaaaaaaaatccaaataaattcgcttttaaaaaagctcaagaaattccttta
gatgatcctgaagtttataaattattttctgaagatatgaaaataacttctgctcaaaat
gaaacaattacaatcgattctttagggattccggaatttggaacaaccttcgttaaacaa
atgttaaaagatattaaaaaaaatcataaaaaaaatatcaattttgctgatttagttaaa
atttctgggctttctcatggaaccgatgtttggcttaaaaacgctaaagatgtcattggt
caaacgggtgattttgaaaaatataaaaaccaaaatatttcttttgatgacattattggt
tgtcgcgatgatattatgttgcaattgcaagataaaggtgttgatgctttaaaagctttt
gaaatcatggaattcatccgcaaaggtcaaccacaaaatgatccaaaaacttggcaagat
tataaaaatttgatggaaggaaaagttgaaaactggtatattgattcagctgaaaaaatc
aagtatttgttcccaaaggcccatgcaactgcttatgttattatggctttaagaattgct
tggtttaaagtttatgctcctttgattttttatagtggttatttttccaaaagagcagaa
caatttgatcatcaaattatgattagcaatgatccagaaattattcaaaacaaaatcaat
aatcttaaaaaaaatgaaatcaaagcaaaagaagcggttttgattaacactctccaaata
gccaaagaaatgttacaacgtggttttaaatttttaagcgttgatttcaataaatcagat
attgatgtttttaaaatagaaaacgataattatttgagaatgcctttgctttgcattgat
ggtttaggaatgattgctgctaaaaaaattataaaaactcgcgaagacaaaccttttact
caagaagattttcgcactcgttctagggttaacaaaaaaatatttgaacaaattataaaa
gaaaatcttttagaatccttacccaaagaataa

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