Candidatus Phytoplasma australiense: PA0623
Help
Entry
PA0623 CDS
T00752
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pal
Candidatus Phytoplasma australiense
Pathway
pal03030
DNA replication
pal03430
Mismatch repair
pal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA0623 (dnaX)
03430 Mismatch repair
PA0623 (dnaX)
03440 Homologous recombination
PA0623 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pal03032
]
PA0623 (dnaX)
03400 DNA repair and recombination proteins [BR:
pal03400
]
PA0623 (dnaX)
Enzymes [BR:
pal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PA0623 (dnaX)
DNA replication proteins [BR:
pal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PA0623 (dnaX)
DNA repair and recombination proteins [BR:
pal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PA0623 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
AAA_30
RCF1-5-like_lid
AAA_assoc_2
AAA_18
PIF1
AAA_14
nSTAND3
AAA_16
AAA_17
Mg_chelatase
AAA_19
UBA_4
TsaE
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAM11957
UniProt:
B1VAI4
LinkDB
All DBs
Position
618865..620673
Genome browser
AA seq
602 aa
AA seq
DB search
MVVSYLVLYRKYRPQTFQDVVGQKFIIQTLKNAIRYQKINHCYLFSGNKGTGKTTLAKIF
AKVINCIYPQSGDVCNKCTSCLGSLQTNNDIVELDGASYNGVDEIREIQDKAQYKPHIGK
NKVYIIDEVHVLTPNAFNALLKILEEPPKHVVFILITTQMHKIPETILSRAQSFSFENLS
LENIILQLKKITNLEKIVITDDAIKDIANYSEGSMRNALSLLDQISSYQNNLITSEDIAE
IKGVVSGSFLKNLFCCLIERNYNQALKLLNKAVDSGKNLDLLVANLINSLKNYFLEQLKQ
NEKEQNENLGKKNINNYELELQIDFILQIFLKLQQNLKKSSQKKDLLEIAFIQICYFSPS
HQNLSISETEKILKPNATKIEIEKTKVISEKKPDLNNFSKSIQKKEEALIYPKKEQTITN
NTSTSNFASNSYFKISSLKNLADIALNILSDKNESQRQKIANAWHKLNTNYNFSSKNIAQ
LLYKGSMAALSQKKEMILVYQDEIACKQMLKDVNNKIKNKALKILNNKSCLVKDYICFLE
KDYKDLVTFLQNNSPDLIEHFLENCNWDLDLYKTREKAEELSFIVQFAYDLFGKDKVEVI
NE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttggtagtgtcttatcttgttttatatagaaaatatcgacctcaaacttttcaagacgtt
gtcggacaaaaatttattattcaaactttaaaaaatgctattagatatcaaaaaattaac
cactgttatcttttcagcggaaacaaaggaactggaaaaacaactttagccaaaatattt
gctaaagttattaattgcatatatcctcaatcaggagacgtttgcaataaatgcacgtca
tgccttggatctttgcaaacaaacaacgatattgtggaacttgacggagcttcttataat
ggagttgatgaaataagagagatccaagacaaggcccaatataaaccccacattggaaaa
aataaagtctatattatcgatgaagttcatgttttaactcccaatgcttttaacgcttta
ttaaaaattttagaagagccaccaaaacatgttgtctttattttaataaccacacaaatg
cacaaaattcctgaaactattttatcccgtgcgcaaagtttttcttttgaaaatttaagc
cttgaaaatatcattttacaattaaaaaaaattaccaatttagaaaaaattgtaattact
gatgatgctatcaaagatattgctaactattctgaaggaagcatgcgcaatgctttaagt
ttattagatcaaataagttcttatcaaaataatttaattacttctgaagatattgcagaa
atcaaaggagttgtatcaggaagttttttaaaaaatttattttgttgccttatcgaaaga
aactacaatcaagcgttaaaattactaaacaaagcggttgattcagggaaaaaccttgat
ttattagttgccaatttaattaattccttaaaaaattatttcttagaacaattaaaacaa
aatgaaaaagagcaaaatgaaaatttaggcaaaaaaaatataaataattacgagcttgag
ttgcaaattgattttattttgcaaatttttttaaaattacaacaaaatttaaaaaaaagc
agtcaaaaaaaagatttattagaaattgcttttatacaaatatgttatttttctccttct
catcaaaatttatcaatatcagagactgaaaaaatcttaaaaccaaatgcaactaaaatt
gaaattgaaaaaacaaaagtaattagcgaaaaaaaacctgatttaaataatttttccaag
tcaatccaaaaaaaagaagaagcattaatttatccaaaaaaagaacaaacgataacaaat
aatacttctacttctaattttgcttctaattcttattttaaaatttcttctttaaaaaat
ttagcagacattgctttaaatattttatccgataaaaatgaaagccaaagacaaaaaatc
gctaacgcttggcacaagttaaatacaaattataatttttcttctaaaaatatcgctcaa
ctcttatataaaggaagtatggctgctttaagtcaaaaaaaagaaatgattttagtttac
caagacgaaatcgcctgtaaacaaatgttaaaagacgttaacaacaagattaaaaataaa
gctttaaaaattttaaataataaaagttgtcttgttaaagattatatttgttttttagaa
aaagattataaagatttagtaacttttttacaaaataattctcctgacttaatcgaacat
tttttggaaaattgcaattgggatctagatttatataaaactagagaaaaggcggaagaa
ctatcttttattgttcaattcgcttatgatttgtttggtaaagataaagtagaagtaata
aatgaatga
DBGET
integrated database retrieval system
