Providencia alcalifaciens: CO695_01465
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Entry
CO695_01465 CDS
T05107
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pala
Providencia alcalifaciens
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pala03400
]
CO695_01465
DNA repair and recombination proteins [BR:
pala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CO695_01465
Archaeal homologous recombinant proteins
CO695_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
FMN_bind_2
ABC_tran
AAA_21
BLOC1_2
TRPM_tetra
AAA_25
SMC_N
cobW
Astro_VPg
MobB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG15032
UniProt:
A0A9N7DS57
LinkDB
All DBs
Position
294677..298360
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTEEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGQISKSKNELMTRHTGECLAEVEFEVKGIAYRAFWSQRRANNKADGNLQDPKAELATVA
DGQIIAEKVSEIREKIVQITGLDFGRFTKSILLSQGDFAAFLNATEKERADLLEEITGTE
IYSQISVYIFNQHKQAKTDLDLLRAQASSVNLLTEIEYQELVEKQQQYSAQEQQLSQSKL
RHQQAVTWHQQYQQLAQNTQRLQLAQQQAQQRYQVAEPQLHKLAQSSPAEALRPDWLAVQ
SLQTQLDEQTQKQQRITQHLEEAQKQRLPLVTQHAQAQLEQNQYNEWVQKTTVMIDNEVR
PLDNRLSQLNQQKLQLSEQLSQLNSEYLQKKASVENAQQQIDHAKSGLNKTQLFLQEHAN
DAQIITQLGRWQQQGQFVYELTEQLTKNQQKQHAIKLEWQTLQQAQLQKLKEHQKAQLSL
ETFHSRFNQLEKQFQEYKEKHDISAINALIIQLQAQLQHAQILPLLLSQHEEKHQQVQLH
IQQQNQLAESIQQVEKLIAITQDRVTQLEPQRQVLEQKLQLEQKIVSLEHERQQLIEGTP
CPLCGSLKHPALEAYHAVTPNETQQQLVALNTQIESEKQQLTEHQALLQADKRRQQDNEA
TQKQLQVQLDALNTQWRQACKQALTPELAKTHLAVEQCLLDLRNQLTVQQTITSEFTQLE
RQHQEAKNHYYEQQAQTKQLLSELSLLDEKLKYHSQQLDENQAEQHALKQRIEQQTQQLA
TSLSPFNLTLPSQEQFSSWLKEIEQRGQYYEAQKTAAQQFAKSIEVHAATLAAETTYAQQ
IERQLASQQQHFEQLNQQIGHANTQRQNMLDGQAITVFTQNMQVQQAQYARKVDELTLQI
SEIDKHIAALTGSAQELDEQLKQLNQRQSVAQAQFIDALKNSPFDTQEQFLNALLPAEEK
IQLEQLKQQVTQQQLEAETRYQESLLSLANHEQQRLVEFAELSLEHIQHVLTELDNKIKE
LNQQQGQIINQLERDQQQRHQQRELLNKIEQSQLSYDDWSYLNSLIGSAEGDKFRRYAQG
LTLDCLVSLANQQLDKLHGRYLLQRSHLANLELQVIDGWQADSIRDIKTLSGGESFLVSL
SLALALSDMVSHRTQLESLFLDEGFGTLDAETLDIALDALESLNASGKTIGVISHVEAMK
ERIPVQITVKKANGLGYSELSSHYRVS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattttaagcttacgtctcaaaaatattaattcccttaaaggtgaatggaaaatt
gatttcactgaagaaccgtttgccagcaatgggttatttgccatcactggtgctacggga
gcaggaaaaaccaccttattagatgctatctgcctcgcgctataccatcaaaccccacgt
ttagggcaaatctcaaaaagtaaaaatgaactgatgactcgccatacgggcgaatgctta
gcggaagtagaatttgaagttaaaggtatcgcttatcgtgcattctggagccaacgccgc
gcaaataataaagccgatggcaacctccaagatcctaaagcagagctagcaaccgtcgct
gatgggcaaattatcgcagaaaaagtcagtgaaattcgtgaaaaaattgtgcaaatcacg
ggattggattttggacgtttcaccaaatctattttactttcccaaggtgattttgccgct
tttctcaatgccacagaaaaagaacgcgctgacttattggaagagatcactggcaccgaa
atttatagtcaaatttcggtctatatctttaatcagcataaacaagccaaaactgatctc
gatctccttcgagcacaagccagtagcgtcaatctgcttacggaaatcgaatatcaagag
cttgttgaaaagcagcaacaatattcagcccaagaacagcagctgagtcaaagtaaactt
cgccatcaacaagccgtgacttggcaccaacagtatcaacagctcgcacaaaatacccag
cgcttacagctagcgcaacagcaagctcaacaacgctatcaagtggcagagccccaatta
cacaagctcgctcaaagctctcctgcggaagccttacgcccggattggctggcagtgcaa
agcttgcaaactcaacttgatgaacagactcaaaaacagcaacgcataacccaacactta
gaagaggctcaaaagcaacgtttacctttagtgacccaacatgcccaagcgcagcttgaa
caaaatcaatacaatgaatgggtacagaaaacgacggtcatgatcgataacgaagtgcgc
ccattagacaatcgactttcccagctcaatcaacaaaaattgcaactctcagagcaatta
agtcagctaaacagtgagtatttacagaaaaaagcaagtgtagagaacgctcagcagcaa
attgatcatgcaaagagtgggctgaataaaacgcaattatttctccaagaacacgcaaat
gacgcccaaataattacccaattagggcgctggcaacagcaaggtcaatttgtttatgaa
ctgactgaacaactcactaaaaatcagcaaaaacagcacgcaatcaagctagaatggcaa
acattgcaacaagctcaattgcaaaaactgaaagaacatcaaaaagctcagctcagtctt
gaaacctttcactcccgctttaatcagcttgaaaaacaatttcaagaatacaaagaaaaa
cacgatataagtgcaattaacgctctcattattcaactgcaagcacagttacagcatgct
caaatactgccacttttactctcgcaacatgaggaaaaacaccagcaagtacagctacac
attcagcaacaaaaccagctcgcagaatctatccagcaagtggaaaaactgattgcaatt
acacaagatagagtgactcaattggagcctcaacgccaagttttagaacaaaaacttcaa
ctagaacaaaaaattgtcagcttggaacatgaacgccaacaactcattgaaggaacaccg
tgccccctttgtggctcattaaagcatcctgctttagaggcataccatgctgttacgcca
aacgaaacccagcaacaattggttgcgctcaacacacagatagaatccgaaaaacaacaa
ctcaccgaacaccaagcattattacaagcggataaacgtcgccaacaagataatgaagca
acacaaaaacagttacaggtccaattagatgcgctcaatacccaatggcgacaagcttgt
aagcaagcacttacaccggaattagcgaaaacacatctcgcagtagagcaatgcctttta
gatttgcgcaatcaactcacggttcagcaaaccatcaccagtgaatttacacagctggaa
cgccaacaccaagaggcaaaaaaccactattacgaacagcaagctcaaactaagcaactg
ctctccgagctatcgcttcttgatgaaaaacttaaataccattcccagcaattagacgaa
aaccaagcggaacaacacgctttgaaacaacgcattgagcagcaaacacagcagctagcc
acctcgctctcgccatttaacctaacgctaccaagccaagaacagttttcctcttggcta
aaagaaattgaacaacgcgggcaatactatgaggcgcaaaaaacagccgctcaacagttc
gctaaaagtattgaagttcatgccgctactctcgcagcggaaacaacctatgcacaacaa
attgagcgacaactcgcgtcacaacagcaacattttgagcagctaaatcagcaaattggg
catgcgaatacccaacgtcaaaacatgctagacggccaagctatcactgtttttacccaa
aatatgcaggtgcagcaggctcaatatgctcgtaaagtcgatgaacttactctgcaaatc
agtgagatagacaaacacatcgctgcactcacaggaagtgcccaagaactcgatgaacaa
ctcaaacaactcaatcaacgacaatctgttgcacaagctcagtttattgatgcgcttaag
aacagcccgtttgacacccaagagcaattcctgaatgccctccttcctgccgaagaaaaa
attcagcttgagcaacttaaacaacaagtgactcagcagcagcttgaagcggaaacccgc
tatcaagaaagcctcttatctctcgccaatcatgaacaacaacgtttagttgaatttgcg
gagttgtcattggagcacattcaacatgtattgactgagttagataataaaatcaaggaa
ttaaaccaacaacaagggcagattattaaccaactcgagcgcgatcaacagcaacgtcac
caacagcgcgagttattgaataaaattgaacagagccaattaagctacgatgattggagt
tacctcaacagcttaataggctccgctgaaggggataaatttcgccgttatgctcagggg
ttaaccttagactgcttagtctctttagctaaccaacaactcgataaattgcatggtcgc
tatttgctgcaaagaagccatttagccaaccttgaattacaagttattgatggctggcaa
gcggatagtattcgcgatattaaaacactgtctggaggggaaagcttcttagtcagtttg
tcgctagcccttgcactctctgacatggtgagtcatcgaacccaactggaatcgctcttt
cttgatgaaggtttcggtacattggatgccgaaaccttagacattgctttagatgcatta
gagagcctcaacgcttcaggaaaaaccattggtgttattagccacgttgaagccatgaaa
gaacgaattccggtacaaattaccgtgaaaaaagcaaatggtcttggctatagtgaactc
tcaagccactatcgtgtcagttaa
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integrated database retrieval system