Providencia alcalifaciens: CO695_04680
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Entry
CO695_04680 CDS
T05107
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pala
Providencia alcalifaciens
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pala03032
]
CO695_04680 (gyrB)
03400 DNA repair and recombination proteins [BR:
pala03400
]
CO695_04680 (gyrB)
Enzymes [BR:
pala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CO695_04680 (gyrB)
DNA replication proteins [BR:
pala03032
]
Prokaryotic type
DNA Topoisomerases
CO695_04680 (gyrB)
DNA repair and recombination proteins [BR:
pala03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CO695_04680 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
DUF6865
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATG15633
LinkDB
All DBs
Position
complement(1033753..1036167)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGFCDDIV
ITIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRRDGKVHEQIYKHGEPQGPLTVVGETDQTGTRVRFWPSMDTFKGVT
EFEYDILAKRLRELSFLNSGVSIRLIDKRDGKEDHFHYEGGIKAFVEYLSRNKTPIHPSV
FYFSTEKDGIGVEVSMQWNDGFQENVYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYMEKE
GYQKKTKVSATGDDAREGLIAVISVKVPDPKFSSQTKEKLVSSEVKTAVETLMNEKLVEY
LLENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHIFIAQPPLYKVKRG
KQEQYIKDDEAMDDYLISIALDGAELHLSAEAPAMKGEQLEKLVVEYNAAHRIIRRLERL
YPQALLNSLVYQSTLTEDALKDSAQVEEWAKTLVARLEENEQAGSSYSYIIHENRERQLF
EPTIRIRTHGVDSDYNLDFDFVHGSEYRRITELGDIISGLIEEGAYIQRGERRQNIDNFE
QALEWLSRESRRGLSVQRYKGLGEMNPEQLWETTMNPETRRMMRVTIKDAIATDQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacatatgactcctcaagtatcaaggtattaaaaggactggatgcggtgcgt
aagcgcccgggcatgtatatcggtgataccgacgatggaacaggtcttcatcacatggtc
ttcgaggttgtggataacgctatcgatgaagccttagctggtttctgtgacgatatcgtc
atcactatccatgccgacaactccgtctctgtacaagatgatgggcgtggtatcccaacg
ggcatccacgaagaagaaggtgtttctgccgcagaagtcatcatgaccgttctgcacgcc
ggcggtaaatttgacgacaactcctacaaagtctccggtggtctgcacggtgtgggtgtt
tcagtggttaacgccttatccgaaaaacttgaattagtaatccgccgtgacggtaaagtt
cacgaacaaatatacaaacacggcgagccacaaggtcctctaacagttgttggagaaaca
gaccaaacagggactcgtgtacgtttctggccaagcatggacaccttcaaaggtgtgact
gaattcgaatacgatattctggcaaaacgcttacgtgaactttcattcctgaactcaggc
gtttcaatccgtttaattgataaacgagatggcaaagaagaccatttccactatgaaggt
gggatcaaagcctttgttgagtatctgagccgtaataaaaccccaattcacccatccgta
ttttatttctctactgagaaagacgggattggcgtggaagtttccatgcagtggaacgac
ggtttccaagagaatgtttactgcttcaccaacaacattcctcagcgtgatggaggtacc
cacttagcgggcttccgtgccgcgatgacccgaaccctgaataactacatggaaaaagaa
ggctatcagaaaaaaacgaaagtcagtgcaacgggtgatgatgctcgtgaaggcttgatt
gccgttatttctgtaaaagtgccagatcctaaattctcttctcaaactaaagaaaaactg
gtttcttccgaagtgaaaacagctgtcgaaaccttaatgaatgaaaaattggttgagtat
ttattagagaatccaaacgacgccaaaatcgttgttggcaaaatcattgatgctgcacgt
gcccgtgaagctgcacgtaaagcccgtgaaatgactcgccgtaaaggcgcgttagattta
gcaggtttgccaggtaaactcgctgactgccaagaacgtgaccctgcattatctgaactg
tacttagtggaaggggactctgcgggcggctctgcaaaacaaggccgtaaccgtaagaac
caagctattttgccactgaaaggtaaaatcctgaacgtggaaaaagcgcgtttcgacaaa
atgctctcttcccaagaagttgcgacactgatcaccgcattaggctgtggtattggtcgt
gatgaatacaacccagataaactgcgttatcacagcatcatcatcatgacggatgctgac
gtcgatggttcgcacattcgtacattgctgttaactttcttctaccgtcaaatgccagaa
atcgttgaacgtggtcatatctttattgctcagccgccactgtataaagtgaaacgcggt
aagcaagagcaatacattaaagatgatgaagcgatggatgactatctgatctctatcgca
ctggacggtgctgagttacatttaagtgcggaagccccagccatgaaaggcgaacaactg
gaaaaactggttgttgaatacaatgcagcgcaccgtattattcgccgtcttgagcgttta
tatccacaagcgctgctgaacagcttagtgtatcaatccacactgactgaagacgcactg
aaagatagcgcccaagttgaagaatgggcgaaaactttagtggcgcgtttagaagaaaac
gagcaagcgggtagctcttacagctatattattcatgaaaaccgtgaacgccagctattc
gagcctactattcgtatccgtacccacggtgttgatagcgactacaacctcgatttcgac
ttcgtacatggtagtgagtatcgtcgtatcaccgagttaggtgacataatcagtggttta
atcgaggaaggtgcttatattcaacgcggtgaacgtcgccagaatatcgacaacttcgag
caagcattagagtggttaagccgtgaatctcgtcgtggtttatccgtacagcgttataaa
ggtcttggtgaaatgaacccagaacaactttgggaaaccaccatgaatccagaaactcgc
cgtatgatgcgtgtcactatcaaagatgcaattgcaacagatcagctgttcaccacattg
atgggagatgccgtagaaccgcgtcgtgcctttatcgaagagaacgccttaaaagccgcg
aacatcgatatttaa
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