Providencia alcalifaciens: CO695_05700
Help
Entry
CO695_05700 CDS
T05107
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pala
Providencia alcalifaciens
Pathway
pala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CO695_05700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pala03019
]
CO695_05700
Enzymes [BR:
pala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CO695_05700
Messenger RNA biogenesis [BR:
pala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CO695_05700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG15814
LinkDB
All DBs
Position
complement(1235222..1236508)
Genome browser
AA seq
428 aa
AA seq
DB search
MSKAHLTEKKFSDFALHPKVIEALNKKGFNFCTPIQASTLPYTVEGKDVAGQAQTGTGKT
LAFLTSTFHFLLTHPAIEGKKTNQPRALIMAPTRELAVQIYSDAKELAEYTGLKMGLAYG
GDGYDEQLRVLQDGVDILIGTTGRLIDYAKQGHVDLAAIQVIVLDEADRMYDLGFIKDIR
WLFRRMPSATDRLNLLFSATLSYRVRELAFEQMNSPEYIEVEPLQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVAQKKRLRILE
QFTQGQIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGNSISLA
CEEYALNLPAIEEYIQHSIPVSKYNSDALLSDLPAPKRRHRPRPSGPRRNSNAPRRHNGP
RNNHKRAG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcacacttgacagaaaagaagttttccgacttcgcattgcacccaaaagtc
attgaagcacttaacaaaaaaggcttcaacttttgcacgcctattcaggcgtctaccctg
ccttatactgtcgaaggcaaagatgttgcggggcaagcgcaaacaggtacaggtaaaacg
ttagcatttctaacgtctacatttcattttctcttaactcacccagctattgaagggaaa
aaaaccaatcagccacgtgcgctgatcatggctcctactcgcgaattagcggtgcagatt
tattccgacgcgaaagaattagcagagtacaccggtttaaaaatgggtctagcctatggt
ggtgatggctacgacgaacaattacgcgtattacaagacggcgttgatattctcatcgga
acaacaggtcgtctgattgattatgccaaacaaggccacgttgatttagcggctatccaa
gttattgtattggatgaagcggaccgtatgtatgaccttggttttattaaagatattcgt
tggttattccgtcgcatgcctagcgcaacggatagactaaatttactgttctccgcaaca
ctctcttaccgcgtgagagaattagcattcgaacaaatgaacagtccagaatatatcgaa
gttgaaccgctgcaaaaaacaggtcaccgcattaaagaagaactgttttatccatccaat
gaagaaaaaatgcgtctgctgcaaacgctgcttgaagaagagtggcctgagcgctgtatt
attttcgcaaataccaagcatcgttgtgatgatatttgggctcaccttgctgccgacggt
caccgtgtaggattactcacaggtgatgtcgcacagaaaaaacgcctgcgtattttagaa
cagttcacccaaggtcagattgatatcttggttgcgactgacgttgccgctcgcggacta
cacattccatcagtaactcatgtctttaactatgatttacctgacgattgtgaagactat
gtacaccgcatcggacgtactggtcgtgcaggtgaaagcggaaactccatcagcttagct
tgtgaagaatacgcactgaatttacctgcaattgaagaatatattcagcactccatccct
gtcagtaaatacaacagtgatgcactcctgagcgacctaccggcaccgaaacgccgccat
cgtccgcgcccaagtggtccacgccgcaattcaaatgcaccgcgtcgccataatggtcca
cgtaataaccataaacgtgcaggctga
DBGET
integrated database retrieval system
