Providencia alcalifaciens: CO695_05860
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Entry
CO695_05860 CDS
T05107
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pala
Providencia alcalifaciens
Pathway
pala03420
Nucleotide excision repair
pala03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CO695_05860
03430 Mismatch repair
CO695_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pala03400
]
CO695_05860
Enzymes [BR:
pala01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CO695_05860
DNA repair and recombination proteins [BR:
pala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CO695_05860
MMR (mismatch excision repair)
Other MMR factors
CO695_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG15841
UniProt:
A0AAW9V785
LinkDB
All DBs
Position
1267209..1269371
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AA seq
720 aa
AA seq
DB search
MDVSYLLEGLNDKQREAVAAPRTNLLVLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAV
TFTNKAAAEMRHRINQLVGTSEGGMWIGTFHGLAHRLLRQHYLDANLPQDFQILDSDDQY
RLIRRLLKAMNLDEKQWPPRQGMWYINGKKDEGLRPQHIESYGNPVEATWLKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLQHYRERFTNILVDEFQDTNSIQYAWIRVLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTNNILKSANTLIANN
SDRLGKNLWTEGGDGEPISLYCAFNELDEARYVVGRIKQWHENGGALQDCAILYRSNAQS
RVMEEALIQGAMAYRIYGGQRFFERQEIKDALSYLRLIANRNDDASFERVVNTPTRGIGE
RTLDTVRQTARDQQLTLWESCEYLLREQVLGGRAASSIERFLELIEALAKETQEMPLHVQ
ADRVINDSGLRAMYEQEKGEKAQARIENLEELVNATRDFSYQDEDQDLMPLQAFLSHAAL
ESGEGQADVNQDAVQLMTLHSAKGLEFPVVFIVGMEEGMFPSQMSMDESGRLEEERRLAY
VGITRAMVKLTITYAESRRLYGKEVYHRPSRFIGELPTECVEEVRLRATVSRPVSHQRLG
TPISQNDSGYALGQRVRHAKFGEGTIINLEGSGEHCRLQIAFQGQGIKWLVASYARLEML
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcatatctgctcgaaggtcttaatgacaaacaacgcgaagcggttgccgcc
ccgcgaactaatttactggtactcgctggggcggggagcggtaaaacgcgtgtgttggta
catcgcattgcttggctaatgtcggtggaaaatgcgtctccgttttcgattatggctgtg
acgtttaccaacaaagctgccgcagaaatgcgtcatcgtattaatcagttagtgggaacc
agcgaaggtggaatgtggattggtactttccacggtttagcacaccgcttactccgtcag
cactatttagatgccaatttgccacaagattttcaaattctagacagtgacgaccaatat
cgtctgatccgccgtctacttaaagctatgaatctcgatgagaaacagtggccacctcgc
caaggtatgtggtacatcaacggtaaaaaagatgaagggctgcgtcctcagcatattgaa
agttatggtaatccagtagaggcgacgtggttgaaggtataccaagcctatcaagaagcc
tgtgatcgcgctgggctggtggattttgctgaattactgttgcgtgctcatgagttatgg
ctgaacaagcctcatgttctccagcattaccgtgagcgttttactaatatcttggtggat
gaattccaagataccaacagcattcaatatgcttggattcgggtattagctggcgatacg
ggcaaagtgatgatcgtgggggacgatgaccaatcaatttatggttggcgtggtgcacaa
gttgagaatattcagcgtttcttgaatgattttcccggcgctgaaactatccgtcttgag
caaaattaccgttcaaccaataatattttgaaatcagcgaatacgctcatcgccaataat
agtgaccgactcggtaaaaatttgtggacagagggcggcgatggcgaacctatttccctt
tattgtgccttcaatgagcttgatgaagcccgctatgtggttggacgcatcaagcaatgg
catgaaaacggtggtgctttacaagattgcgcgatcctctaccgaagtaatgcccaatct
cgtgtcatggaagaagcgttaattcaaggtgcgatggcataccgtatttacggcggccag
cgcttctttgagcgccaagaaattaaagatgcgctctcatacttgagattgattgctaac
cgtaatgacgacgcttcttttgagcgtgtggtgaacacaccaacgcgaggcattggtgag
agaacattggatacagttcgtcaaactgctcgggatcagcaactgactttatgggagagt
tgtgagtacttacttcgcgaacaggtattgggcggcagggctgcgagttcaattgaacgt
tttcttgagttaatcgaagcattagcgaaagagacccaagagatgccattacatgttcaa
gccgaccgagtgatcaatgattccggtttacgagcaatgtatgagcaagaaaagggtgag
aaagcccaagctcgaattgaaaacttggaagagttagtcaacgcgacacgtgactttagc
tatcaagatgaagaccaagatttaatgccattacaggcatttttatctcacgctgcatta
gagtctggtgaaggacaggctgatgtcaaccaagatgccgttcaattgatgacattgcac
tctgctaaagggcttgaatttcctgtggtatttatcgtaggaatggaggaaggtatgttc
ccaagtcaaatgtctatggacgaaagcggccgccttgaagaagagcgtcgtctggcttat
gtagggattacccgtgcgatggtaaagctgacgattacctatgcagaaagccgtcgttta
tatggtaaagaagtttatcatcgtccttctcgcttcattggtgagttgccaacagaatgt
gtggaagaggtacgtttaagagcgacagtttctcgtcctgtcagtcatcaacgtcttggt
acgccaatcagccagaatgattcaggttatgcattagggcagcgagtcagacatgcgaaa
tttggcgaaggcaccatcattaaccttgagggaagtggtgagcattgccgattgcaaatt
gcgtttcagggacaaggcattaaatggctggtagcgtcttatgctcgattagaaatgttg
tag
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