Providencia alcalifaciens: CO695_06630
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Entry
CO695_06630 CDS
T05107
Name
(GenBank) formate hydrogenlyase
KO
K12146
hydrogenase-4 transcriptional activator
Organism
pala
Providencia alcalifaciens
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pala03000
]
CO695_06630
Transcription factors [BR:
pala03000
]
Prokaryotic type
Helix-turn-helix
Other families
CO695_06630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
AAA_2
GAF_3
HTH_8
Mg_chelatase
AAA_7
MCM
AAA
HTH_50
AAA_16
ResIII
AAA_3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATG15980
LinkDB
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Position
1428346..1429941
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AA seq
531 aa
AA seq
DB search
MSISETTEQIRHERDQFRILVDITNSVLSHLEMDGLVAEVSREIYRFFGISQISVALCDN
VSSAVYLCYSSHYQRSKPVKKSQYPLNELHADLAQVLESNKPLRLTLDQQSQDLLYQNLC
AEGMTETLLLPLAFNHKPLGVLVLSHEDDHLFTEDSCNLLKQVAARFAIAVDNAAAYGEI
TRLKDSLKNENLWLNEQIQNTNNFSEIIFQSQAMREVLEQVDLVARSDSTVLILGETGTG
KELIARAVHQLSDRHQRSLIKMNCAAIPTGLLESDLFGHDKGAFTGATCTHIGRFEMADK
STLFLDEIGDMPLDLQPKLLRVLQEREIERIGGNKVIPVDVRLVAATNRNLKQMTEDREF
REDLYYRLNVFPIVIPPLRDRPEDIPLLATYFTQKMAQRMNRKIDCIPRDALAQLSLYPW
PGNVRELENVIERAVILTRGNTLNIQLHELNIPKPSRIKDALKKPSSLERKMQTDAPESD
DEERNRIIEALKAMNGVVAGVRGAAARLGLKRTTLLSRMQRLGINVQDLFQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatatccgaaaccaccgaacaaattcgtcatgaacgagaccaattcaggatcctt
gtagatatcacgaactcagtgctttctcaccttgaaatggatgggttagtggctgaagtt
tcacgcgaaatataccgcttttttggtattagccaaatcagcgtcgccctttgcgataat
gtcagttcagcggtttatctttgctattcaagccattatcagcgctcaaagccagttaaa
aaaagccaatatccgctgaatgaattacatgctgacctcgctcaagtattagagagcaac
aaacctttgcgtttaacgttggatcaacagagccaagatttgttatatcaaaatttgtgt
gcagaagggatgacggaaacgttattgttaccgttagcatttaaccataagccattaggc
gttttggtgttatcccatgaagatgaccatctttttaccgaagatagctgcaatttactg
aaacaggtggcggcgcgttttgccattgccgtcgataacgccgcggcttacggtgaaatt
acgcgccttaaagatagtctgaaaaatgaaaatttatggctgaatgagcagatccaaaat
accaataacttcagcgaaattattttccaaagccaagctatgcgtgaagtcctcgagcag
gttgatttagtggctcgtagcgatagtacggtattgatcttgggagaaacgggaacaggt
aaagaattaattgctcgagccgttcatcagctaagcgaccgccatcagcgttcattgatt
aaaatgaactgtgccgcaatcccgacagggttactagaaagtgacttgtttgggcatgat
aaaggcgcattcactggggcgacctgtacgcatattggtcgttttgaaatggcagataaa
agcacgttatttctagatgaaattggcgatatgccattggatttacaaccaaaattattg
cgtgttttgcaagagcgtgaaattgagcgtattggtgggaataaagtgattccggtggat
gtgcgcttagtggcagcaaccaaccgtaatcttaaacagatgacggaagaccgagagttt
cgtgaagatctctattatcgtttaaatgtattcccaatcgtgatcccgccattacgagac
cgacctgaagatattccattacttgcgacctattttacccaaaaaatggcgcagcgaatg
aaccgtaaaattgattgtattcctcgtgatgcactggcgcagttatcactgtatccatgg
cccggtaatgtgcgggaattggaaaatgtaattgagcgagcggtgattttaacccgtgga
aatacactgaatattcagttgcatgagttaaatattcctaagccatctcgtattaaagac
gcgctaaaaaagccgagttctttagaaagaaaaatgcagactgatgcgccagagagtgac
gacgaagagcgaaaccgcattattgaagcgctgaaagcgatgaatggagtggttgcaggt
gtaagaggggcggcagctcgtttagggttaaaacgcacgacgttactgtcgaggatgcaa
cgattagggattaatgttcaagacctcttccaataa
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