Providencia alcalifaciens: CO695_08150
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Entry
CO695_08150 CDS
T05107
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pala
Providencia alcalifaciens
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pala03021
]
CO695_08150
Transcription machinery [BR:
pala03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CO695_08150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
COG2_N
Motif
Other DBs
NCBI-ProteinID:
ATG16269
LinkDB
All DBs
Position
complement(1758093..1760999)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGAVVAIDARMVTLLFPATGENRLYSRSDAPITRVMFNEGDT
ITSHEGWQLQVESIQEDKGLLTYTGTRLDTQEADVSLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKFQSEQVKHQATGLRGIRASLIPHQLHIANEVGKRHHPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLVIVPDSLQHQWLVEMLRRFNLRFSLFDDSRYSEAQH
DSDNPFETEQLVLCSLDFVRRNKQRFDQLVDAGWDMMVVDEAHHLQWSETAPSREYQVIE
TLAEHVPSVLLLTATPEQLGQESHFARLRLLDPSRFHDYQEFLAEQENYRPVADAVSLLL
SGDKLTNDQQNILNELIKEQDIEPLLKAANLEGDDSQAARQELIHMLMDRHGTSRLLFRN
TRNGVKGFPRRELHSLKMPLPTQYQTAIKVAGIMGTKKDVETRAKEMLYPEQIYQEFEGE
NATWWNFDPRVEWLMGFLTANRHEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSL
LERDRAAAYFASQEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQSRDIVINVPYLENTAQSVLIRWYHEGLDAFEYTCPTGRTIYDKYYQQLLQFMAEPTIT
DGFDEFIKNCREEHDALKAQLEQGRDRLLEMHSNGGDAGNQLAEEIGEGDNETELVNFAL
NLFDIVGINQEDKSDNLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDTQFISWE
HPIIRNGLDLVLSGDTGSCAVSVLKNKALPVGTLLTELIYVVEAQAPKQLQISRFLPATP
VRLLIDLKGNNLSSQVEFESFNRQLNAINRHMASKLVNAVQNEVHSVLRLSEPMIEKEAK
SIIENAKEAADKALTLELSRLEALKAVNPNIRDEELDIIEEERRQLMTNIDQASWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggatcagcgacacagaaagcgaacttgggttaggc
gccgtcgtggctattgatgcccgtatggtgacgttgcttttccctgcaacaggggaaaac
agactgtattcacgaagtgatgcgcccatcacccgagtgatgttcaacgaaggtgatacc
atcaccagtcacgaaggttggcagctacaagttgaaagtattcaagaagataaagggtta
ctgacctataccggaacgcgcttagacacccaagaagcggatgtcagtttgcgagaggtt
ttcctcgatagcaaattgacgtttaataagccacaagacaggctgttcgcgggtcaaatc
gatcgtatggatcgcttcgctctgcgttttcgcgcacgtaaattccaaagcgaacaagtt
aaacaccaagccactggcttacgtggtatccgcgcaagtttaatccctcatcagctgcat
attgctaacgaagtaggtaaacgtcatcatccgcgcgttttactggcagacgaagtgggc
ttaggaaaaacaatcgaagcgggtatgattatccatcaacaattgatggcgggtcgtgct
gagcgcgtcttagtgattgtaccggatagcttgcagcaccaatggctagtcgaaatgctg
cgccgctttaatttacgcttttccctatttgatgatagccgctacagtgaagcgcaacat
gatagcgataatccatttgaaactgagcagttagtactgtgttctttggattttgttcgc
cgtaataaacagcgctttgaccaactcgttgacgcaggctgggatatgatggtggttgat
gaagctcatcacctgcaatggagcgaaaccgccccaagccgtgaatatcaagtcattgaa
acgttagcggaacatgttccatctgtgttgctattaaccgcaacccctgagcagcttggt
caagagagtcactttgcgcgtttgcgcctcctcgatcctagccgtttccacgactaccaa
gagtttttagctgagcaagaaaactatcgccctgtcgcagatgcggtttcactgctgctg
tctggcgataaattaacgaacgatcagcaaaatatactgaacgaactcattaaagaacaa
gatattgagccgttactgaaagctgcgaatcttgaaggtgatgatagccaagccgctcgc
caagaactgatccacatgctgatggacagacacggtactagccgcctgttatttagaaac
actcgtaatggtgtcaaaggcttcccacgccgtgaattgcattctttaaaaatgccactg
ccaactcaataccaaacggcaatcaaagtcgctggcattatgggcacgaaaaaggatgtg
gaaactcgcgcaaaagagatgctgtatcctgaacaaatctaccaagaatttgaaggcgaa
aacgccacttggtggaactttgacccacgtgttgaatggctgatgggcttcttaaccgcg
aatcgccacgaaaaagtactggttatctgtgctaaagctgccaccgcattgcaacttgag
caagttctgcgtgaacgtgaagggatccgcgccgcggtattccacgaaggtttatcgctg
ttagagcgtgaccgtgctgctgcctactttgcttcacaagaagagggggcacaggtttta
ctgtgttcagaaattggctccgaaggccgtaacttccaatttgctaaccaattagtgatg
tttgatctgccattcaaccctgacctacttgagcagcgtattgggcgtttggatcgtatt
ggtcaaagccgcgatatcgtcatcaacgtgccgtacttagaaaatactgcgcaatctgtg
ttgatccgctggtaccacgaagggttagatgcattcgagtatacttgcccaacgggtcgt
actatttacgacaaatactatcagcaactgctgcaatttatggcagagccaactatcact
gacgggtttgatgaatttatcaaaaactgccgtgaagaacacgatgcactgaaagcccag
ttagagcaaggtcgcgaccgattgctggaaatgcactcaaatggtggtgatgcgggtaat
caactagccgaagaaattggcgaaggagataacgaaactgagttagtcaactttgcgttg
aacttatttgatatcgtaggcatcaatcaagaagataagagcgataacttaattatcctc
acgccatcagatcatatgttagtccctgatttcccaggattaccacaagatggttgcacc
atcacctttgatcgtgagcaggctctttcgcgcgaagatacacagtttattagttgggag
cacccaattattcgtaacggtttggacttagtgttatcgggtgataccggtagctgtgcc
gtgtctgttttgaaaaataaagcattgccagtcggtacattattgaccgaattgatttat
gtggttgaagctcaagcccctaaacaactgcaaatcagtcgtttcctacccgcaacgcca
gtacgtttattaattgatttaaaaggtaataacctctcttcacaagtggaattcgagagc
tttaaccgccaattaaatgcaattaaccgtcatatggcgagcaagttagtcaatgcggta
caaaacgaagtgcattcagtgctacgactctctgaaccaatgattgagaaagaagctaaa
tctattattgagaatgcgaaagaagcggccgataaagctctaactcttgagctgtcacgt
ttagaagcactgaaagcggttaacccgaatatccgtgatgaagaactcgacattatcgaa
gaagagcgtcgccaattgatgaccaatatcgaccaagcatcatggcgcctcgatgctatt
cgcctcgtggttgtcacgcatcagtag
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