Providencia alcalifaciens: CO695_08770
Help
Entry
CO695_08770 CDS
T05107
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pala
Providencia alcalifaciens
Pathway
pala03030
DNA replication
pala03430
Mismatch repair
pala03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CO695_08770
03430 Mismatch repair
CO695_08770
03440 Homologous recombination
CO695_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pala03032
]
CO695_08770
03400 DNA repair and recombination proteins [BR:
pala03400
]
CO695_08770
Enzymes [BR:
pala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CO695_08770
DNA replication proteins [BR:
pala03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CO695_08770
DNA repair and recombination proteins [BR:
pala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CO695_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
ATG16381
LinkDB
All DBs
Position
1873589..1877071
Genome browser
AA seq
1160 aa
AA seq
DB search
MASPRFIHLRVHSDYSMIDGLAKTGPLVKKVAAMGMPAFAITDFTNLCGLVKFYGAAHGA
GIKPIIGADFYMESEQLGDEVAHLTVLARNNEGYQNLTLLISEAYQKGYGAIGPTIHRDW
LVKHKEGLILLSGGRKGDVGQFLLRGNQALVDESLEFYQTYFPDAYYLELIRTGRPDEES
YLHAAVELATQRGLPVVATNDVCFIESSDFDAHEIRVAIHDGYTLADPKRPKNYSPQQYL
RTEEEMCELFSDIPEALENSVEIAKRCNVTIRLGEYFLPKFPTGDMETEDFLVMRAKEGL
EERLKFLFPDEKVRAEKRPEYDERLEIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLELDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAQ
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFEVEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKKNLDPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVNWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGSIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARQQGGIFKEIFDLCARVDIKKINRRVMEKLIMAGAFDHLGPHRAALMS
SLEDALKAADQHAKAEAIGQGDMFGVLAEAPEQVESSYASVPKWPEQVVLDGERETLGLY
LTGHPITRYLSEIERYTNGLRLKDVNPTPRGQVTTVVGLVLSAKVITTKRGNRIGICTLD
DRSGRLDIMLFSDALDKYQHMLEKDNILIATGQVSFDDFNGGNKMTVRELMDIGEAREKY
ARGLAISLSDKQINDQLLNRLRNALEPHRSGTIPVHLYYQKDDARAKLKFGVVWRVTPVD
PLLNDLRTLLGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctcgttttattcatctacgtgttcatagtgactattccatgattgatggg
ctggcaaaaaccggtccattagtcaaaaaagttgccgccatgggcatgcctgcatttgcc
atcacggattttactaacctttgtgggttagtgaagttttatggtgcggctcatggtgcg
ggtatcaagccaatcattggggctgatttttatatggaaagtgagcaactgggtgatgag
gttgctcacttaaccgttctggctcgcaataacgaaggctatcaaaacctcactttactc
atctccgaagcataccaaaaaggctatggcgccattggtccaacgattcatcgcgattgg
cttgtcaaacataaagaaggtttaatcctattatcaggcgggcgaaaaggggatgtgggg
caatttttactgcgcggtaaccaagcgttagtggatgaaagccttgaattttatcaaaca
tatttccctgatgcttattatctggagcttatacgtacaggtcgacctgatgaagaaagc
taccttcatgcggcggttgagctggcaacccagcgcggcctgcctgttgttgcgactaac
gatgtctgttttattgaaagcagtgattttgatgcccatgaaattcgtgtcgctatccat
gatggttatacattagccgatccgaaacgccctaaaaattatagtcctcagcaatactta
cgtactgaagaagagatgtgtgagctgttttccgacatccctgaagcattagaaaacagt
gtagagattgctaagcgctgtaacgtaaccattcgtcttggtgaatatttcctgcctaaa
ttcccgactggggatatggaaacagaagactttttggttatgcgtgcgaaagaaggctta
gaagagcgactcaaatttttattcccagacgaaaaagtgcgggctgaaaagcgccctgaa
tacgatgagcgtttagaaatagagcttaatgttatcaaccagatgggattccctggttat
ttcttgatcgtgatggagtttatccaatggtcgaaagataatggtgttcctgttggacca
ggtcgaggttcaggtgctggttctttagtcgcttatgccttaaaaattacagatttagat
cctcttgagctagatttactgtttgagcgtttcctaaaccctgagcgggtttctatgcct
gacttcgacgttgacttctgcatggaaaaacgggatcaagttattgatcacgtagcacaa
atgtatggacgagatgccgtatctcagattattactttcggtacgatggctgcaaaagcc
gttattcgtgacgtagggcgtgtgcttggtcatccatatggtttcgtggatcgcatttct
aaattagttcctcctgacccaggaatgactctcgagaaagcgtttgaagttgagccacaa
ctgccagagatttatgaggcagatgaagaggtcaaagcgctgattgatatggcgcgtaag
cttgaaggggtaactcgaaacgccggtaaacatgcgggtggggtggtgattgccccaact
aagattactgattttgcaccactctattgtgatgcagaaggaaataacccagttacgcaa
tttgacaagaacgatgttgaatatgcagggctggtgaagtttgacttcttaggtctccga
acgctgaccatcattaactgggcattggaaatgatcaatgcccgtcgagcgaagaaaaac
ttagatccaattgatatcgctgcaattccattggatgacaaaaaaagcttcgatatgcta
cagcgctcagaaactacggcggtattccagttggaatcccgcggaatgaaggatctgatt
aagcgcctgcaaccagactgctttgaagatatgatcgcattggtggcgttattccgccca
ggaccattgcaatcaggaatggtagataactttatcgaccgtaaacatggacgtgaagag
atatcataccctgatgtgaattggcagcacgaatcattaaaacctgttctagagccaact
tatggtattatcctataccaagaacaggttatgcagattgctcaggtgttagcgggttac
acccttggtggcgcagatatgctgcgtcgtgcgatgggtaaaaagaaacctgaagagatg
gcaaaacagcgctccgtttttgaggaaggttctatcaaaaatggggtagatggcgaattg
tcgatgaaaatctttgacttggtggagaaattcgccggttatggatttaacaaatcgcac
tcggctgcttatgctctcgtttcataccaaaccttatggttaaaagcccattatccggct
gaatttatggcagcggtaatgaccgcggatatggataataccgaaaaagtggtgggactg
gttgacgaatgctggcgtatgggcttaaaagtattgccgccagatatcaatagcgggcta
tatcacttccatgtgaatgatgaaggtgagatagtttacggaattggtgcgattaaaggc
gtcggagaaggtccaattgaggcgatcattgaggctcgccaacaaggcgggatcttcaaa
gaaatttttgatctttgtgcccgagtggatattaaaaagatcaaccgccgtgtgatggaa
aaactgatcatggcaggggctttcgatcatttaggtcctcatcgtgctgcgttaatgtct
tcccttgaggatgcattaaaagctgctgatcagcatgcaaaagctgaagctatcgggcaa
ggcgatatgttcggtgttcttgctgaagcccctgaacaagttgaaagctcttacgcaagt
gtaccgaaatggcctgaacaagtcgtgcttgatggtgagcgtgaaacattggggctgtat
ttgacaggtcacccaataacgcgatacttaagtgagatagagcgttatacgaatggtttg
agattaaaagatgtgaacccaacccctcgtggtcaagtgacaactgtggtaggtttagtg
ctctctgcaaaagtgatcaccacgaagcgtgggaacagaattgggatttgtacgcttgat
gatcgttccggtcgtctggatattatgttattttcagatgcgctggataaataccaacat
atgttggaaaaagacaatattttgattgccaccggtcaggtcagctttgatgatttcaat
ggtggtaataaaatgacagtgcgcgaattgatggatatcggagaagcaagggagaaatat
gcgcgcggccttgcaatatcgttgtccgataaacaaattaacgatcaattactgaatcgg
cttcgcaatgctcttgaacctcaccgctcaggcacgataccggttcatttgtattatcag
aaggatgatgccagagctaagctcaagtttggcgttgtttggcgtgtgacacccgtggat
ccccttctgaacgaccttcgaactctgctgggtagtgagcaggtagaattagaatttgac
taa
DBGET
integrated database retrieval system
