Providencia alcalifaciens: CO695_14385
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Entry
CO695_14385 CDS
T05107
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pala
Providencia alcalifaciens
Brite
KEGG Orthology (KO) [BR:
pala00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pala03016
]
CO695_14385
Enzymes [BR:
pala01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CO695_14385
Transfer RNA biogenesis [BR:
pala03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CO695_14385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
ATG17429
LinkDB
All DBs
Position
complement(3056488..3058431)
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AA seq
647 aa
AA seq
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MFQDNPLLAQLKQTLHAKTPRVEGLVKSTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAAVHTDKDREFAEPEELIEPFLNRFVGKIQKKDNDNRLFVIPDHPLLKDAISCRPINGI
THEFKQGDWVVAEMRRHPLKGDKGFYAEITEYITYGDDHFAPWWVTLRRHQLDRAEPAMV
DSERDDEGLERVDLTHLHFVTIDSASTEDMDDALYIEKTAEGNLKLYIAIADPTSYIKEG
SELDKLALARSFTNYLPGFNIPMLPRQLSDDLCSLRPNARRPALVCVTQILQDGAIDSNI
EFFSAWVESKTKLVYDEVSDWLEETGSWKPQSDADTQQIRLLKEMADKRLQWRHDNALVF
KDRPDYRFVLDENGNVVEIVSESRRTANRIVEEAMITANLCAANVLKNKLGFGVFNVHMG
FEPLQIEQVVQTLKDNGIEANGEALLTLEGFRELRRLLDSQPTQFLDSRIRRFQTFAEVK
ADPGPHFGLGFEAYATWTSPIRKYTDIVNHRLLKSIIAGAPTPAKPSEELSIKLAERRRA
NRMAERDVGDWLYSRYLKPFEGTETRFPAEIIDITRGGVRVRLVDNGAVAFIPAPFLHSV
RDEIQCSQETGSVLIKGEKAYQLNDIIDVNIAEVRMETRNIVARPAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaacccattactagcgcaactcaaacagacgttgcatgccaaaacacct
cgcgtcgaaggtctggttaaaagcacagaaaaaggatttggctttttagaagtcgatgga
caaaaaagctattttattccgcctccgcaaatgaaaaaagtgatgcacggagatagaatt
tctgccgccgttcatacggataaagaccgcgagttcgctgaacctgaagaattaatcgaa
ccatttctcaaccgttttgtcggtaaaattcagaaaaaagataacgataatcgcctgttt
gtcatccctgaccatccgctgttaaaagatgccatttcatgccgaccaatcaacggtatt
acccatgaattcaagcaaggtgactgggtcgttgccgaaatgcgccgtcatccactaaag
ggtgacaaaggcttctatgctgaaattacagaatatattacctacggtgacgaccatttc
gcaccgtggtgggtaacgttacgccgtcaccaattagaccgtgcagaaccggcaatggtg
gacagtgagcgtgatgacgaaggtttagaacgtgttgatttaactcatctacactttgtc
actatcgatagcgcaagcaccgaagatatggatgatgcactgtatatcgaaaaaacggct
gaaggtaacctgaagctgtatatcgctatcgcagatccaaccagctatatcaaggaagga
agtgaattagacaaactcgctttagctcgctcattcaccaattacctgcctggcttcaat
attccaatgttgcctcgccaactttctgatgacttgtgctctctgcgaccaaatgcccgt
cgccctgctttggtttgcgttacgcaaatcctgcaagatggtgctattgatagcaatatc
gaattcttcagtgcatgggtcgaatcaaaaactaagcttgtctacgatgaagtatctgat
tggttagaagaaacgggatcatggaagccacaatctgatgccgatacacaacaaatcaga
ctattaaaagaaatggcggataaacgcctgcaatggcgtcatgataatgcattagtgttc
aaagacagaccggattaccgttttgttttagatgaaaatggtaacgtggtcgagatcgtt
tcagaaagccgtcgtactgcaaaccgcattgttgaagaagcgatgatcaccgctaactta
tgtgccgctaacgtcctgaaaaacaaattaggttttggtgtatttaacgtccatatgggc
tttgaaccgttgcagatcgaacaagtcgttcaaacgctgaaagataatggcatcgaagcc
aatggtgaagcgttattaacgcttgaaggcttccgtgaattgcgtcgcctattagattcg
cagccaacccaattcttagacagccgcattcgccgcttccaaacctttgctgaagtgaaa
gcggacccaggtccacactttggtctgggctttgaagcatatgcaacatggacatcgccg
attcgtaaatacaccgatatcgtcaaccaccgtttgttgaaatcgattatcgcaggcgcg
ccaacgccagcaaaaccaagtgaagaactgtcaataaaattagcagaacgccgccgtgct
aaccgcatggctgaacgtgatgttggcgactggttatactctcgttacctaaaaccattt
gaaggaactgagaccagattccccgctgaaattattgatattacccgtggtggtgtgcgc
gtacgtttagtcgataacggcgctgttgcctttatccctgcgccattcttacacagtgtt
cgtgatgagattcaatgcagccaagaaacaggcagtgtattgatcaaaggcgaaaaagcc
tatcaattaaacgatattattgatgtgaatatcgcagaagtacgcatggaaactcgcaat
atcgtcgctcgcccagcggcgtaa
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