Paenibacillus albus: EJC50_02530
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Entry
EJC50_02530 CDS
T06567
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
palb
Paenibacillus albus
Pathway
palb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJC50_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palb03019
]
EJC50_02530
03009 Ribosome biogenesis [BR:
palb03009
]
EJC50_02530
Enzymes [BR:
palb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EJC50_02530
Messenger RNA biogenesis [BR:
palb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EJC50_02530
Ribosome biogenesis [BR:
palb03009
]
Prokaryotic type
rRNA helicases
EJC50_02530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
DUF3638
Intein_splicing
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AZN43481
UniProt:
A0A3Q8XA48
LinkDB
All DBs
Position
complement(552249..554207)
Genome browser
AA seq
652 aa
AA seq
DB search
MQPPPCFWGRLRFILNGRFVNINEVDLLAGFEQLGIGKERTQSLRNEGIQEATPIQEGAI
PVILQGSDVICQAQTGTGKTLAFLLPMLEKIRADRDQLQGLILTPTRELALQITTELKKR
LATREEFSVLAVYGGQDVESQLRKLKRAVHIVVATPGRLLDHIRRGTISLGAVKMLVLDE
ADQMLHMGFLTEVEEILQQMPYRKQTMLFSATMPAGVRSLAARFMIEPKDITVRAPQVTV
KAIRQLAVEVSAKGKEEHLKRLLEEHNPYLGVIFCRTKKRVSALNDYLQEKGFVSDELHG
DLSQAKREQVMKRFRDAKLQLLVATDVAARGLDVEGVTHVFNYDIPENAEGYIHRIGRTG
RAGEDGIAITLVSPHDRLELAAIERGIHQTIPRENSRGGVAVVREAVKQADKRERGEGGR
RGEGRRGGAGAGGGRSGGRSGGPGRGPRGEAGAARGRGEAGGEKRSAGGGAYGAAAKRGE
GRGAARDAESPQWGAAARSEAPRGRGRVAAAGSGSSRSGSGDATRGGRGRYSTPAREEGA
GGAPREASFSRGEGTRGRGASGASAPRSGGRAGAAPQFPGSGERGRGSSGASGSGERSRS
GGGGRPSGSGGDRSRSGGGGRPSGGGRSGGGRPGGGGKPGAGGRSSQRGRTR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccgccgtgcttttggggacggcttcgtttcattttgaacggcaggtttgta
aacataaatgaggtggatctattggcaggttttgaacaattaggtattggcaaggagcgg
acgcaatcgcttcggaatgaagggattcaggaggcgacgccgatccaggaaggcgcgata
ccggttattttgcagggcagtgacgttatctgtcaggcgcagacgggaacgggcaagacg
ctcgcgttcctgcttccgatgctggagaaaatcagagcggatcgcgatcagctgcaaggc
ttgattctgacgccgacgcgcgagctggcgctgcaaattacgacggagcttaagaaacgt
cttgctacgcgtgaagaattcagcgtgcttgcagtttatggtggacaagatgtggagtcg
cagctgcgcaagctgaagcgtgcggtccatatcgttgtagcaacgccgggtcgtttgctc
gatcatattcgcagagggacgatttcgcttggcgcggtcaaaatgctcgtgcttgatgag
gccgatcaaatgctgcacatgggcttcctgactgaggtcgaggaaattttgcagcaaatg
ccgtaccgtaagcagacgatgctgttctcggcgacgatgccggctggcgtgcgttcgctc
gcagctcggttcatgattgagccgaaggatattacggttcgtgcgccgcaggtgacggtg
aaggcgattcgccagctggcggtggaagtgagcgcgaaaggcaaggaagagcatctgaag
cggctgctggaagagcacaacccgtatttgggcgttattttctgccggacgaagaagcgc
gtgagtgcgctgaacgattatttgcaggaaaaaggttttgtcagcgacgagctgcacggt
gacctctcgcaagcgaagcgcgagcaagtcatgaagcggttccgcgatgcgaagctgcaa
ttgcttgtggcaacagacgttgctgcgcgcggtcttgatgttgaaggcgtgacgcatgtc
ttcaactatgacattccggagaatgccgagggctatattcaccggatcggtcgtacaggc
cgtgccggcgaggacggcattgcgattacgcttgtgtcgccgcatgatcgtctggagctg
gctgctatcgagagaggcatccatcagacgattccgcgcgagaacagccgcggcggcgta
gcggtcgttcgtgaagcggtcaagcaggctgacaagcgcgagcgcggcgaaggcggccgc
cgtggcgagggccgcagaggcggagctggagctggcggcggccggtcgggcggtcgctca
ggcggaccggggcgtggacctcgcggcgaagcgggagcggctcgtggccgtggcgaagct
ggcggcgagaagcgttccgcaggcggaggcgcctatggcgcagcagcgaagcgcggcgaa
ggccgtggcgcggcgcgcgacgcagagtcgccgcaatggggcgctgcggcaagatcggaa
gcgccgcgcggccgtggtcgtgtagcggcggcgggatcggggtcatcgcgcagtggcagc
ggtgacgcgacgcgcggaggtcgcgggcgttacagcacgccggcgcgcgaggaaggcgcc
ggcggtgctcctcgcgaagcgagcttcagccgcggcgaaggcacgcgtggccgcggagca
agcggtgcttccgcgccgcgcagcggtgggcgcgcgggcgcagcgccgcagttccctggc
agcggcgagcgtggtcgcggcagcagcggtgcatcgggcagcggtgagcggagccgcagc
ggtggcggaggccgtccgtcaggaagcggcggcgatcggagtcgcagcggtggtggcggt
cgtccgtcaggcggcggtcggtcgggcggtggtcgcccaggtggcggcggcaagccaggc
gctggcggtcgttcgtcacagcgcggtcggacgcgttaa
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