Paenibacillus albus: EJC50_04920
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Entry
EJC50_04920 CDS
T06567
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
palb
Paenibacillus albus
Pathway
palb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EJC50_04920 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_04920 (xth)
Enzymes [BR:
palb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EJC50_04920 (xth)
DNA repair and recombination proteins [BR:
palb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EJC50_04920 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF2709
Motif
Other DBs
NCBI-ProteinID:
AZN39086
UniProt:
A0A3Q8X348
LinkDB
All DBs
Position
complement(1041889..1042662)
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AA seq
257 aa
AA seq
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MKLVSWNVNGLRACVTKGFYDYFAEVDADLFCLQETKLQEGQIEMELGDAYKTYWNYAEK
KGYSGTAVFTRVEPLSVRYGMEEDYEPEGRLLTLEFEGFYLVNVYTPNAKRDLSRLDYRL
EWEERFRRYLVELDAKKPVILCGDLNVAHKEIDLKHPKPNLGNSGFTLEEREKMTQLLGA
GFTDSFRHFYPDRTDVYSWWSYMPKVRERNVGWRIDYFVVSARLEPALIDSQIDCHVLGS
DHCPVVLTLNEEALCTK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtatcatggaatgtaaatgggcttcgcgcctgtgtcacaaaaggattttat
gattattttgccgaggtagacgcagatttgttctgcttgcaggagacgaagctgcaggaa
ggccagattgagatggagcttggcgacgcgtacaagacatattggaactatgccgagaag
aagggttactcgggtacggccgtcttcactcgagtggagccgctatccgtgcgctatggc
atggaagaggattatgagccggaaggcaggctactcacgcttgagttcgaaggcttctac
ctcgttaacgtctatacaccgaacgccaagcgcgacctatcacggctggattaccggttg
gaatgggaagagcgattccgccgatacctggtcgagctagacgcgaagaagcctgtcatt
ctgtgtggtgacttgaacgtcgcgcataaggaaatcgacttgaagcatccgaagccgaat
ctcggcaactccggctttactctagaggaacgcgagaagatgacgcagctgctcggagcc
ggcttcaccgactccttccgtcatttctacccggaccgtacggatgtgtattcatggtgg
tcgtacatgccgaaggtgcgcgagcggaatgtgggatggcgtattgactattttgtcgtc
tccgcaaggcttgagcccgcacttattgactcgcagatcgactgtcacgtcttgggcagc
gatcattgtccggttgtactcaccttaaatgaggaggcgctatgtacaaaataa
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