Paenibacillus albus: EJC50_08310
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Entry
EJC50_08310 CDS
T06567
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
palb
Paenibacillus albus
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palb03016
]
EJC50_08310
Enzymes [BR:
palb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EJC50_08310
Transfer RNA biogenesis [BR:
palb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EJC50_08310
Prokaryotic type
tRNA splicing ligases
EJC50_08310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AZN39649
UniProt:
A0A3S9A1M9
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All DBs
Position
1834391..1835617
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AA seq
408 aa
AA seq
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MAYTTIEGVRVWGTPDEGAVSQALTCSETGNVVQTLLMADHHKGYSQPIGGVVVYDGQIS
PSGVGYDIGCGNKAVRTNLLASEIKPMIASIMDTIARRISFGIGRVNDVQVDHELFDDPD
WAVYKAVGRQEHDKLLTLARTQLGTVGSGNHFVDLFEEQATGRLWVANHFGSRGFGHKTA
SGFLNLAAGREFLGNAPGEKMDQPPTLFDINSELGDMYYRAMRLAGRYAYAGRDYVMNQL
LAILGAETDMEVHNHHNYAWKEQHFGKETVVVRKGATPSAPGQLGFIGGSMGDISVIVRG
KDTAENRDACYSTVHGAGRVMSRTAAAGKMNWKTRQRSGGLISPQQMMQAVEAFGVELRG
AGTDESPFVYRKLQDVLDAHSETIDVLHVLKPFGVCMAGADEFDPYKD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcttatacaacaattgaaggtgtccgcgtctggggaacgcctgatgaaggagcagtc
tcgcaagcactgacttgttcggaaaccgggaatgtcgttcagacattgcttatggctgac
catcacaaagggtatagtcagccaattggaggcgtcgtcgtatacgatggacagatctca
ccatccggcgtcggctatgatattggctgcgggaacaaggcggttcggacgaacctgttg
gctagcgagatcaaacctatgattgcttcgattatggacacgattgcgcggcgtatatcg
ttcggtattggccgtgtgaacgatgtgcaggtcgatcacgagctgttcgacgacccggat
tgggcggtgtataaggcggtcggcaggcaggagcatgataagctgcttacactggcgcgg
actcagttggggactgtgggaagcgggaaccattttgtcgatttgttcgaggagcaggcg
acggggcggttgtgggtggcgaatcattttggcagtcgcggattcgggcataagacggcg
agcggcttcctcaatctcgcagcaggcagggagtttctagggaatgcgccaggcgagaaa
atggatcagccgccaaccttgttcgatattaacagcgagctcggtgatatgtactaccgt
gccatgcggcttgccgggcgatacgcctacgccggacgcgactatgtgatgaatcaattg
cttgccatactaggtgcagagacggacatggaggtccataatcaccataactatgcgtgg
aaagagcagcatttcggcaaagagacggtcgtcgttcgcaagggagcgacgccttccgca
cctggtcagctcggatttatcggcggcagtatgggcgatatctccgtcatcgtgcgcggc
aaagacacggctgagaatcgcgatgcgtgctacagcacggtgcacggagcggggcgagtg
atgagccggacggcagccgctggcaaaatgaactggaagacgcggcagcgcagcggcggc
ctaatctctccgcagcagatgatgcaggcggtggaagcgttcggcgtcgagcttcgcgga
gcaggtacggacgagagcccattcgtctaccgcaagctgcaggatgtgcttgatgcgcac
agcgaaacaattgatgtgctgcatgtgctgaagccattcggggtatgtatggctggtgcg
gatgaatttgatccgtacaaagattaa
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