Paenibacillus albus: EJC50_11985
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Entry
EJC50_11985 CDS
T06567
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
palb
Paenibacillus albus
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palb03019
]
EJC50_11985
Messenger RNA biogenesis [BR:
palb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJC50_11985
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AZN43671
UniProt:
A0A3Q8X9V2
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All DBs
Position
2667943..2668899
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AA seq
318 aa
AA seq
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MTNVRDMRDGEDFVGFYLIKESEVKQTNTTPPKDFMNLMLSDSTGQISAKIWDAAQSDKD
NFTAMSLVKVQGTAQLYRDKLQVKIIRIRRTTEADGVNITDFIRSAPVGAAELLATVYAT
KDSIVDHDIRAVVQYCLDKIGDRLLHAPAAKTHHHAYYAGLVYHIVRMLEIGAFLCKQRP
FLNADLIKAGIILHDIAKPVEMVSELGIVSDYSTPGKLIGHISQASLWITEAAIHLDIDP
DAERIMALQHLVLSHHNLGEWGSPVQPQLAEAVALHHIDSMDAKLQMIEDAFATIPDDES
WTAPIRGLENKAIYRLNF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgtgcgcgatatgcgcgatggcgaggatttcgttggcttctatctcattaag
gagagtgaagtaaagcagacgaatacgacgccgccgaaggattttatgaatttgatgctg
tctgattcgactggacagatttcggccaagatttgggatgctgcacagagcgataaagat
aacttcacggcgatgtcgcttgtgaaggtgcaaggcacagcccagctgtaccgggataag
ctgcaagtaaagattatacgcattcgcaggacgacggaagcggacggtgtcaacataacc
gatttcatacgttcagcgccggtcggagcggcagagctgcttgcaacggtctacgccacg
aaagacagtattgtggatcacgatatacgtgcagtcgttcaatattgcttagacaaaatc
ggtgatcggctgcttcatgctccggcagcgaagacgcatcatcatgcatattacgccggg
ttggtgtatcatattgtaagaatgctggagattggcgcgtttctgtgcaagcagcggcct
tttttaaatgccgatttgattaaagccggtatcattcttcacgatattgcaaagcccgtt
gagatggtatccgagctgggcatcgtttcggattacagcacgccgggcaagctgatcggg
catatttcgcaagcatcgctgtggattaccgaagcggcgattcacctcgacatagacccg
gacgctgagcgcatcatggcgctgcagcatcttgtcctctcccatcacaacctaggcgag
tggggaagtccggtgcagccgcagctggcagaggcagttgccttgcatcatatcgactcg
atggatgcgaagctgcaaatgattgaggatgcttttgcaacaattccggatgatgaatcg
tggacggcaccgatccgcgggctggagaacaaagcgatttatcggttgaatttctaa
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