Paenibacillus albus: EJC50_12345
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Entry
EJC50_12345 CDS
T06567
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
palb
Paenibacillus albus
Pathway
palb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EJC50_12345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_12345
Enzymes [BR:
palb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EJC50_12345
DNA repair and recombination proteins [BR:
palb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJC50_12345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
AAA_11
UvrD_C_2
Viral_helicase1
AAA_22
PIF1
SLFN-g3_helicase
AAA_12
Helicase_RecD
DEAD
SH3_13
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AZN40348
UniProt:
A0A3Q8X584
LinkDB
All DBs
Position
2753396..2755522
Genome browser
AA seq
708 aa
AA seq
DB search
MKDNLVFSGRLTRIKPKGQEKEGWFEPDEGSSFRIRARALPTRFRNLRIEGRLTTEHTLV
IQRYCLLEPISQLLPEHFSTRHPAAFQRMHPFFGNEIQTLIEQPELLDQLTASDKLAREL
VRNNLIEQYTMPNLLNYLQRFNLSRKMLHEICELLGIPAIDLIEEQPYLLNRVPSVPFQV
ADTLSLEKGLEANSPLRIGAAVQYVYIQYLNGGNSYISAAEFENRVYALLGKSLPKDKIR
LEIERFAEEQDHELICRGNLFFDRHLYFAEIQIAQRLADLIAIPSSKPGSLSSTIQSLIS
AGRLPDLDEDQQRGIEQFFEHPVLLVRGEAGTGKSSWIAYLIIVLETLLPGIQIKLAAPT
GKAARQLEGMTGCPAQTIHSLLGKGREKTSRIWYHFKRNPLNADVLIIDEASMVNEYLWR
DLLWSVERGTRLVFVGDPNQLEPIGPGRPFLDMISLGFPTVTLKRNYRNDSTILSLARAV
LQGEVGHSQLEAAGILMIPAESVAETKENIVRIYQDKAKQYPVITMYREQYSLGTDRLNV
YMKQQINPLVVAEGMGLGDPVIQTINTARADNGEVGVIRSVHPSQSSRVFFEPDKEVVYT
LPELVSEMELAYAITTAKTQGSQYEGVIIPLTDIGIEIPHRQSMWYKNSLYTALTRARKE
LILIGDPQIIIKGAERKGTTRKTMLVKRIQHVFNGSGILPGTSALPKG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaccttgtcttttcaggacgtctgacgagaatcaagcccaaggggcaggag
aaagaaggctggtttgagcccgatgaaggttcgtcgtttcgtatccgtgcaagagcgctt
ccgactcgtttccgaaaccttcgcatagaaggtcggctcacaaccgagcatacattagtc
atccaacgatactgcctcctcgaaccaatctcccagctgcttccggagcatttctccacc
cgccatcccgcagcctttcaacgcatgcatcccttcttcggcaacgagatacagacactg
atcgaacaaccggagctgctggaccaattgacggcaagtgacaagctggcaagagagctg
gtgcggaataacctgatcgagcagtacaccatgccgaatctgcttaattatctgcagcgg
ttcaatctttctcgtaaaatgcttcatgagatttgtgagctgttaggcattccggccatt
gacttgatcgaagagcagccgtatctgttgaaccgcgtcccttccgttcccttccaggtt
gccgatacgctttcgctggaaaaagggcttgaggcgaatagcccactccggatcggggct
gctgttcaatatgtgtatatccaatatttaaacgggggaaacagctacattagcgctgcc
gaattcgagaacagggtctatgctctgttggggaagtcactgcctaaggataaaatccgc
ctcgaaatcgaacggttcgctgaggagcaggatcatgaactcatatgcagaggaaatcta
ttttttgaccggcacttatatttcgcagaaatccaaattgcacagcgcctagccgactta
atcgcaatcccttcgtctaagcccggaagcctgagcagtacgattcagagtttaattagc
gcgggccggcttcctgatctggatgaggatcaacagcggggaatcgaacaattcttcgag
catccggttcttctggtccgcggagaagcgggcacgggaaagagcagttggatcgcgtat
ctgattattgtcttagaaacgcttctgccgggtattcaaatcaagctggccgctcctact
gggaaagcggcgaggcagttggaagggatgaccggctgtccggcacagaccattcattca
ctgctgggcaaggggagagaaaaaacaagccgcatctggtaccacttcaagaggaacccg
ctgaatgcggatgtattgattatcgatgaggccagcatggtcaacgaatatttatggcgt
gatttgctatggtcggtagagcggggaacgagacttgtattcgtcggcgatcctaaccag
ttggaaccgatcggtccgggacgcccgttcctggatatgatttcccttggatttccgaca
gtcacattaaaacgcaattatagaaacgatagcacgattctatcattggcacgagccgtc
cttcagggagaagtcggccattcccagttggaagcagcgggcattctgatgattcctgcc
gaatccgtggcggaaacgaaagaaaacatcgtccggatttatcaagataaagccaagcaa
tatccggttattacgatgtacagggaacaatacagcctcggtacagaccgtttgaacgta
tatatgaagcagcaaatcaacccgctggtcgtggcagaaggaatggggttgggagaccct
gtcattcaaacgatcaacacagcaagagccgacaatggcgaagtaggcgtgatccgatcg
gttcatccatcccaaagcagccgtgttttttttgaaccggataaggaagttgtctatacg
ctgccggagttagtgagcgagatggaacttgcatatgccattacaacggcaaagacgcaa
ggtagtcagtatgaaggagtgattattccgctaactgacattggcatcgaaatccctcac
cgtcaatcgatgtggtataagaattcattgtacacggcgctgacgagagcgcggaaggag
ttaattcttatcggtgatccgcaaattattatcaaaggcgcggagcggaaagggacgacg
cgcaaaacgatgttggttaaacgaatacagcatgtttttaatggatccgggattcttccg
ggcacaagtgccctgccaaagggatga
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