Paenibacillus albus: EJC50_13090
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Entry
EJC50_13090 CDS
T06567
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
palb
Paenibacillus albus
Pathway
palb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EJC50_13090 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palb03021
]
EJC50_13090 (rpoD)
Transcription machinery [BR:
palb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJC50_13090 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AZN40488
UniProt:
A0A3S9A430
LinkDB
All DBs
Position
2921673..2922800
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AA seq
375 aa
AA seq
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MANDQHTELDTEQKLELVKEQLIEHGKKRSSLTYKEIMEKLSPFDQDPEQIDEFFEQLDD
IGIEVVNENDEDQPIGNRDDQEREHDDFNFDDDLALPPGIKINDPVRMYLKEIGRVPLLS
ADDEVELAKRIENGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDHTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRVSRQLLQELGRE
PSPEEIAAEMDLSTEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIEDQEALAPADAAAY
ELLKEQLEDVLDTLTEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgatcaacatactgaactggatactgaacaaaagctggaactcgtcaaggaa
cagctgattgaacatgggaagaaaagatcctccttaacgtacaaagagatcatggagaaa
ctgtccccgtttgatcaggatccggagcaaatcgatgagttcttcgagcaactcgatgat
atcggcattgaagtggtaaatgagaacgacgaggatcagcctataggcaatcgggacgat
caggagcgcgagcatgacgacttcaacttcgatgatgatttggcattaccgcctggtatc
aagataaacgatccggttcgaatgtatttgaaagaaatcggacgtgtgccgctgttgtcg
gctgatgatgaggtggagcttgccaaacggatcgagaacggggatgaagaagcgaagcgc
agactcgctgaagcaaacctaaggctcgtcgttagtatcgcgaaacgttatgttggacga
ggaatgctgtttctcgatcttatccaagaaggcaatatgggtcttattaaagcagttgag
aagttcgatcataccaagggctacaagttcagtacgtatgcaacctggtggatcagacaa
gcgatcacgcgcgcaattgctgaccaagcccgtacgattcggatccctgttcatatggtg
gagacgattaataagctcgtccgagtatcccgtcaattgctgcaagagctaggccgcgag
ccgagcccggaagaaattgcggcagagatggatctgagcacagaaaaagtacgcgagatt
atgaagatcgcgcaagaaccggtatcgttggaaactccgattggggaagaagacgattcg
catttgggtgatttcatcgaagatcaagaggcacttgcaccagcagacgctgctgcgtat
gagctcttgaaggaacagctggaggacgtgctggatacgctcactgagcgtgaagagaac
gtgcttcgacttcgtttcggtcttgatgatggtcgtactcgcacgcttgaggaagtgggc
aaagtgtttggcgttacccgtgaacggattcgtcaaatcgaagcgaaggcgcttcgtaag
cttcgtcacccgtccagaagcaaacgtttgaaagattttcttgaataa
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