Paenibacillus albus: EJC50_15655
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Entry
EJC50_15655 CDS
T06567
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
palb
Paenibacillus albus
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palb03019
]
EJC50_15655 (hrpB)
Enzymes [BR:
palb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EJC50_15655 (hrpB)
Messenger RNA biogenesis [BR:
palb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJC50_15655 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AZN40945
UniProt:
A0A3S9A5F2
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All DBs
Position
3430138..3432681
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AA seq
847 aa
AA seq
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MDDRDRKQQIQSQGELPIDGLLPELQQLLTERNAAVLVAAPGAGKTTRVPLALLSAPWLA
GQRILMLEPRRLAARAAARFMAASLGEQVGGTVGYRVRMDTKVGPSTVIEVITEGVLTRM
LQADPALEGVGIVIFDEFHERHLHGDLGLALCLQTQAVLRDDLRLLVMSATLEAEPVAEL
LGGAPLLVSEGRAYPVETHYAAKPVNGRVEDAITRTVLEAVQRDEGDALVFLPGAGEIHR
VAGLLRASAALPAGTQVVPLYGALSPEEQDRAVAPSAEGERKIVLATTIAESSVTVRGVR
IVVDSGLSRVPRFSPRTGMARLETVPVSVASADQRRGRAGREAPGVCYRLWTEQEHRQLQ
PQSEPELLGADLAPLALELAIWGIADPFEELAWLTKPPAAAYSQAQELLRELGALDAGGK
PTAHGKAMAELGMHPRLAHMVLEAKPLGQGEAACELAALLGERDLLRQTRSIDMRLRVDA
LRGRGAGGGEQPDAAVLARLAAEAREWMRAAGIAPQQRQARAAADADATGLLLALAYPDR
IAQRRGDGRFLLRSGRGAAVQELQPLSSAPYLATAELEDSGSDSRILLGAPITLAELERH
FADQLAEEADVRWDRQAGAVRARRRIRLGSLILKDTQLDRADPELVMNALFSGIAEYGLD
MLPWTKQARQLQARIALMHTHNASWPDVSEEALLASLPEWLGPYVGGMRSRSDLSRLNMA
QIMESLLSWQERSLLDNEVPTHIKVPSGSRIPVDYSDPAAPVLAVRLQELFGLAQTPRIA
GGKLPITIHLLSPAQRPVQVTQDLASFWQNTYFEVKKDLKGRYPKHYWPDNPLEAEPTSR
AKPRPQA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgtgatcggaaacaacaaatacaatcgcaaggcgagctgccgatcgacggc
ttgctgcctgagcttcagcaactgctgacggaacgaaacgcagccgtactcgttgcggct
cccggagcgggtaagacgacgagggtgccgctcgctctgctttcagcgccatggctggct
ggtcagcgcattcttatgctggagccgcgccgattggcagcgcgtgctgcggcccggttc
atggccgcgtcgctcggcgaacaggtaggtggtacggtcggttaccgcgttcggatggat
acgaaggtggggccgtcaacggtgattgaagtgatcaccgaaggggtattaacacgaatg
ctgcaagctgacccggcgctggagggtgtcggtattgtcatctttgacgagttccatgag
cggcatctgcatggcgatctgggactcgcgttatgcttgcagacgcaggctgttcttcgc
gatgatctgcggctgcttgtcatgtcagcgacgctggaagcagagccggtcgcggagctg
ctcggtggtgcgccccttctcgtgagcgaagggcgcgcttatccggtggagacgcattat
gcggcgaaacctgtgaatggccgcgtggaggatgcgatcacgcgcacggtcttggaagct
gtgcagcgcgatgaaggcgatgcgctggtctttctgccgggagcgggcgagattcaccgc
gtagcgggattgcttcgcgcatcggcggcgctgccggccggaacgcaggtggtaccgttg
tacggggcgttatcgccggaagagcaggatcgtgccgttgcgccttcggcggaaggcgaa
cgaaagattgtactcgcgacgaccatcgcggagtcaagcgtcacggttcgcggcgtccgc
atcgtcgtcgacagcggattaagccgcgtgccgcgcttctcgccgcggacaggcatggca
cggctggaaaccgtgccggtgtcggtcgcttcggcggatcagcgccgcgggcgtgccggt
cgcgaagcaccgggcgtctgctaccggctgtggacggagcaggagcatcggcagctgcag
ccgcagagcgagccggagctgctcggcgcggatcttgcgccgcttgcgcttgagctcgcg
atctggggcatcgccgatccgtttgaggagctcgcgtggctgacgaagccgccggctgcc
gcgtactcgcaggcgcaggagctgctgcgcgagcttggcgcgctcgatgcaggaggcaag
ccgaccgcgcacggcaaagcgatggccgagctcggcatgcatccgcgtctcgcgcatatg
gtgctcgaggcgaagccgctcggtcaaggcgaagcggcatgcgagctcgccgcgctgctc
ggcgagcgcgatctgctgcgccagacgcgcagcatcgacatgcggctgcgcgtggatgcg
ctgcgcgggcgcggagccggcggcggagagcagccggacgccgccgtgctggcgcggctc
gccgcggaggcgcgcgaatggatgcgcgccgctggcatcgcgccgcagcagcggcaagca
agagctgccgcggacgcggacgcgaccgggctgctgctcgcgctcgcgtacccggatcgc
atcgcgcagcgccgcggcgacggccggttcttgcttcgcagcggtcgaggtgcggctgta
caggagctgcagccgctctccagcgcgccttacctcgcgaccgcggagcttgaggatagc
ggcagcgacagccgtatcctgctcggcgcgccgataacgctcgctgaacttgagcggcac
ttcgctgatcagctcgccgaagaggcggatgtgcgatgggaccgccaagccggggcggtg
cgagcacggcggcgcatacggctcggatcgctgatcttgaaggatactcagctcgacagg
gctgatccagagcttgtaatgaacgcgctattcagcggcatcgccgaatacgggctggat
atgcttccttggacgaagcaagctcgccagctgcaagcccggatcgcgcttatgcatacg
cacaatgcgagctggccggatgtttccgaagaagcgctgctagcatcgctcccggaatgg
ctcggtccatatgtaggcggtatgcgcagccgaagcgatctttcgcgcctcaatatggcg
cagattatggagtcgctgctgtcctggcaggagcgctcgctgcttgataatgaagtgccg
acgcacatcaaggtgccaagcggttcgcggatccctgtcgattacagcgacccggctgcg
ccggtgctcgctgtccggctgcaggagctgttcggccttgcgcagacgccgcgcattgca
ggcggcaagctcccgattacgattcatcttctgtcgcccgcgcagaggccggtgcaggtg
acgcaggacttggcgagcttttggcagaacacgtattttgaagtaaagaaggacttgaag
ggtcgctatcctaagcattattggccggacaacccgcttgaggcggagccgacaagccgt
gcgaagccaaggccgcaagcttga
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