Paenibacillus albus: EJC50_24140
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Entry
EJC50_24140 CDS
T06567
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
palb
Paenibacillus albus
Pathway
palb03030
DNA replication
palb03410
Base excision repair
palb03420
Nucleotide excision repair
palb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EJC50_24140 (polA)
03410 Base excision repair
EJC50_24140 (polA)
03420 Nucleotide excision repair
EJC50_24140 (polA)
03440 Homologous recombination
EJC50_24140 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palb03032
]
EJC50_24140 (polA)
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_24140 (polA)
Enzymes [BR:
palb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EJC50_24140 (polA)
DNA replication proteins [BR:
palb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EJC50_24140 (polA)
DNA repair and recombination proteins [BR:
palb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EJC50_24140 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJC50_24140 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DNA_pol_P_Exo
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
AZN42427
UniProt:
A0A3Q8X7M8
LinkDB
All DBs
Position
complement(5275953..5278607)
Genome browser
AA seq
884 aa
AA seq
DB search
MAKWILIDGNSIIYRAFFALPQLTNSAGMHTNAVYGFTTMLLKLLEDEKPTHMLVAFDAG
KTTFRHEGYAEYKGGRQKTPPELSEQFPVLKELLKSFGIAQYELPGYEADDIIGTLSRIA
DEGGIETVVVSGDKDMLQLASDNVTIALTRKGISDVERYDPAEINERYGLTPLQIIDLKG
LMGDTSDNIPGIPGVGEKTALKLLHEYGSVEGVIAGVNELKGKMKEKVEEHQESAVMSKK
LATIYREVPLEHQADELVYNGYDDAALGDAFRKLEFKSLIERLGLSEVGSTAVPAAEANY
EILSLSGLPASEVSKLLAASESIYIEAIGDNPHQARLIGIAVASGDRILTVTYDELMGTT
LSAPVRAWLEDEHAPKKGYDLHKAELTLHWMGIDLRGVELDTMLAAYLLDPTDTSLTLAA
LIARYKLAAIQSDEAVYGKGAKFQVPGSDVLAAHLAAKADAVRRLVPVLTEELEKGQMSK
LCYELEQPLAVVLAGMEKQGIKVNPAVLEDLGAELERNIAQYMSDIYTHAGMEFNINSPK
QLGEVLFEKLDLPAWKKTKTGYSTDAEVLEKLAPYHEIVGLILHYRQLAKLQSTYVEGLL
KEIRRDTGKVHTYYRQTIAATGRLSSQFPNLQNIPIRLEEGRRIRKAFVPSEPGWTILAA
DYSQIELRVLAEISGDENMKEAFIKDIDIHTKTAMDVFGVTADQVDSNMRRQAKAVNFGI
VYGISDFGLSNNLNITRDEAARFKEQYFAAFQGVRAYMDNIVVQARENSYVTTLLDRRRY
LPDIHASNFNIRSFAERTAMNTPIQGTAADIIKLAMVNMDKELRARGLRSRMLLQVHDEL
VFEVPQEELELMKTLVPQVMAGALKISVPLRADVSYGDNWYEAK
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatggatattgatcgacggcaacagtatcatatatcgggcattcttcgcactg
ccgcagctgaccaattcggcggggatgcatacgaatgccgtgtacggctttacaacgatg
ctgctgaagctccttgaggatgagaaaccgacgcatatgctagtagcgttcgatgcaggg
aagaccacattccgtcatgagggttatgctgagtataaaggtggacgtcagaagacgccg
ccggagctgtccgagcagttcccagtcttaaaggagctattgaagtctttcggcattgca
cagtatgagctgccgggctacgaggctgacgacattatcggaacgctcagccggattgcg
gatgaaggcggcatcgagacggtcgtcgtctccggggataaagatatgctgcagcttgct
tcggacaatgtaacgattgcgctcacccgtaaagggattagcgatgttgagcgctacgat
cccgctgagattaacgagcgctatggcctgacaccgctgcagattattgatctgaaaggg
ctcatgggcgatacgtccgataatatcccgggcattccgggtgtcggcgagaagacagca
ctgaagctgctgcatgaatacggcagcgtcgaaggcgttattgcgggcgtgaatgagctg
aagggcaagatgaaggaaaaggtcgaggagcatcaggaaagcgccgtgatgagcaagaag
ctcgcgactatctaccgtgaagtgccgcttgagcatcaagcggacgagcttgtttacaac
ggctatgacgatgcggcgctcggcgatgcgttccgcaagctggaattcaagtcgctcatt
gagcgtcttggcttgtctgaagttggcagcacggctgtaccggcagctgaagccaattat
gagatcttatcgctcagcggtttgccggcgagcgaggtttcgaagctgcttgcagcgtcg
gagagcatctatatcgaagcgatcggcgacaatccgcatcaagctcggctgatcggcatt
gcggtcgctagtggcgaccgcattctgacggtgacctatgacgagctgatgggaacgaca
ttgtccgcgcctgtccgcgcttggctggaagatgagcatgcgccgaagaagggctatgac
ttgcacaaagcagagctgacgttgcactggatgggcatcgacctgcgcggtgtggagctc
gacacgatgctcgccgcctatttgctcgacccgaccgatacgagcttgacgctggctgct
ctaatcgcacgctataagcttgcggcgattcagtcggatgaggcggtatatggcaaggga
gcgaagttccaggtgccgggcagcgacgtgcttgccgcgcatctggcagcgaaggcggac
gcggttcgcaggctcgttccggttctgacggaggagctggagaagggccagatgagcaag
ctttgctacgagctcgagcagccgcttgcggttgtgcttgcaggcatggagaagcagggt
atcaaggtgaaccctgccgtgctcgaagacctcggcgcagagctagagcgcaatattgcg
caatatatgagcgatatctatacgcatgcgggcatggaattcaacattaattcgccgaag
cagctgggcgaagtactgttcgagaagcttgatctgccggcgtggaagaagacgaagacc
ggctactccaccgatgcggaagtattggagaagctggcgccatatcatgagatcgtcggc
ttgattctgcactaccgccagctggcgaagctgcagtcgacgtacgtggaagggctgctg
aaggagattcgccgcgatacgggcaaggtgcatacgtattaccggcagacgattgccgcg
acgggccgtctgtcgagccaattcccgaatctgcagaacattccgatccgactcgaggaa
ggccgccgcattcgtaaggcgttcgtgccttcggagccgggctggaccatactcgcagcc
gactattcgcagatcgagcttcgcgtccttgcggagatctccggcgatgagaatatgaag
gaagcgttcatcaaagacatcgacatccatacgaagacggcgatggacgtgttcggcgta
accgcggatcaggtggattcgaacatgcgccgccaagccaaagcggtcaacttcggtatc
gtctacggcatcagcgacttcggcctctcgaacaacttgaacattacgcgggatgaggcg
gcaaggttcaaggagcaatattttgccgcgttccaaggggttcgggcttacatggacaat
atcgtcgtgcaggcgcgggagaacagctatgtgacgacgctcctggatcgccgccgttac
ttgccggatatccatgcgtcgaacttcaatatccgttcattcgcggaacggacagcgatg
aatacgccgattcaaggcacggcggcggatattattaagctggctatggttaacatggac
aaggaactccgcgcgcgcggcttgcgcagccggatgctgctgcaggtacacgatgagctc
gtcttcgaagttccgcaggaggaattggaactgatgaagacactcgtgccgcaagtgatg
gcaggcgcgctgaagattagtgtgccgctcagagcggatgtcagctacggcgacaattgg
tatgaagcgaaataa
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integrated database retrieval system
