Paenibacillus albus: EJC50_24285
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Entry
EJC50_24285 CDS
T06567
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
palb
Paenibacillus albus
Pathway
palb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJC50_24285 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palb03400
]
EJC50_24285 (uvrA)
DNA repair and recombination proteins [BR:
palb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJC50_24285 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJC50_24285 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
DnaJ_CXXCXGXG
NACHT
RsgA_GTPase
AAA_15
AAA_22
AAA_18
AAA_23
nSTAND1
AAA_25
Viral_helicase1
cobW
BTRD1
Septin
Motif
Other DBs
NCBI-ProteinID:
AZN42453
UniProt:
A0A3Q8X7V9
LinkDB
All DBs
Position
complement(5309916..5312834)
Genome browser
AA seq
972 aa
AA seq
DB search
MKKSIEVRGARQNNLKNIDVLIPREQLTVITGVSGSGKSSLAFEVIYGEGQRRFLESLST
FAKSRMSQLKKPDVDFVFGLSPVIAIEQKKGNSNPRSTVGTMTDMYDFMRLLFASSGEAC
CPFCQHPIATKSVNQMIDHVQTLPAGTELEVLAPIFKLYDEDYQTLFDEIRSKGFRSVKI
DGEIHNLSDPLELDDETEYRMEVIVDKVVVMPGLFKSLAKTIENSLELVGDGFIRFEVTN
SEDKKVDMDAFYRNFGCPEHHLVIGELHPSYFSFNDPGSACRTCGGIGTYLRTEKRFLIK
SPEKSVSKGALDHNVYGPSTKKSYRGMFFHSIFTHYGFSLDTPFNELPDEFVDRLFNGTR
GEQFPMLVTDDHPKHAKSQEGKLRKYGGLVNEVNRWYKQYVKRRGENGIGDSDFFKRVMV
EHACPECEGKKLKAQRFCVRIDEKDIHELCSMPLKDLNSLLDRVQFPEEKKHAAGQIVNE
ITSRLKLLIDIGLEYLHLGRRSDTISGGEAQRIRLSTQISTGLMGMLYVLDEPSIGLHAR
DSMRIVETLKKLRDIGNTIIVVEHDLDTIRSADYIIEIGPGPGERGGQVIAQGTALELLE
QKDSLTGAFLTGARRIEVPSKRRAPSGLSLRINGARANNLRNISVDIPLGVMTCVTGVSG
SGKSTLINEVMYKQLYAHFHDQRIVPGEHDSIEGIEHLTGIINIDQSPIGRSTRSNPATY
VGFFDRIRELFADTEEARERGVGKNEFSFNQKTGRCEHCQGEGIITTQLQFMPDVESVCP
SCKGARFNNDVLEVLLNGRNIAQVLDMSIEEAVTFFANQPYVLHKLNVLNQLGLGYLKLG
QSSTTLSGGEAQRIKLATEISKLKRGSHNLYILDEPTTGLHLQDIQKLIDCMNQLVDNGH
SVLVIEHHLDVIKVSDYLIDLGPDGGRDGGMIVAQGTPEQVAAVEASHTGKFLKSILSTD
HQYWAEPMVSPL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagtatcgaggtacgaggcgccagacagaataatttgaagaatattgacgtc
cttatcccccgggaacaattaacggttattacgggggtgagcggatcaggtaaatcctcg
ctagcatttgaagtaatctatggtgaaggtcagcgccgcttcctcgaatctctgtctact
ttcgctaagagccgaatgagtcagctgaagaagccggatgtcgattttgtattcgggttg
tccccggtcattgcgattgagcagaagaaagggaactcgaatcctcgttccaccgtcggt
acgatgacggacatgtatgactttatgaggctgttgtttgcctcttcgggtgaagcatgc
tgtccgttctgccagcatccgattgcaacgaagtcggtcaatcagatgatcgatcatgta
cagacgctgccagcgggaaccgagcttgaggtgctcgcgccaatctttaagctgtacgac
gaagactaccagacgttgttcgacgaaattcggagcaaaggcttccgttcagtcaaaatc
gacggggaaattcataacctcagcgacccgctcgagctcgatgatgaaacggagtatcga
atggaagtcatcgttgataaagtggtcgtgatgccgggacttttcaaatcgctcgccaag
acgattgagaatagtctggagctggtcggcgatggctttatccgcttcgaggttacgaat
tcggaagataaaaaagttgatatggatgcgttttatcgcaattttggctgcccggagcat
catctcgttatcggtgagctgcatccctcttacttctcctttaatgatccgggcagcgca
tgccggacatgcggcgggatcggaacttatttgcgcacagagaagcgcttcttaatcaag
agtccggagaaaagcgttagtaaaggtgcactcgaccataatgtgtacggacccagtacg
aagaaatcgtatcgcggcatgttctttcatagcatatttacacattacggattcagtctc
gacactccgtttaacgaattgccggatgagtttgtagaccgattattcaacggaacccgt
ggcgagcagtttccgatgttggttacggatgatcatcctaagcatgcgaagagccaggaa
ggcaagctgagaaaatacggcggactcgtcaatgaggtgaaccgttggtacaagcagtat
gttaaacgaagaggcgagaacggcatcggggatagtgatttcttcaagagggtcatggtg
gagcatgcttgtccggaatgcgagggcaagaagctcaaagcccaaagattctgtgtgcgc
atcgacgagaaggatatccatgagctatgcagcatgcctttgaaggatctgaattcattg
cttgatcgcgtccagttcccggaagagaagaagcatgcggccgggcaaatcgtgaatgag
attacgtcgaggttgaagctgcttatcgacattggacttgagtatttgcatctgggtcga
agatcggacacgatctctggcggagaggctcagcgaatccggctatccacgcagatcagc
accggcctgatggggatgctctatgtgctggacgagccaagcatcggactgcatgcgaga
gacagtatgcgaatcgtggagacattgaagaagctgcgcgatattggcaacaccattatc
gtcgtcgagcatgaccttgatacgattcgcagcgcggattatattatcgagattggaccg
ggacccggcgaacggggcggtcaagtaatcgcgcaggggacggcattagagctgctggag
cagaaggattcattgactggcgcctttcttaccggtgcaagaagaattgaagtgccttcc
aagcggcgggcaccttcaggcctatcgcttcgtatcaatggcgcaagagcgaacaatctg
cgtaatattagcgtggatattccacttggcgtcatgacatgcgtcacaggcgtgtccggt
tccggcaagagcacgcttattaatgaagtcatgtataagcagctctacgcccacttccat
gatcagcgtatcgtcccaggcgagcatgattccatcgaagggattgagcatctgacgggg
atcatcaacattgatcaatctccgatcggccgaagcacgcgctcgaatccggctacgtat
gttggattctttgaccggattcgtgagctgtttgctgacacagaagaagcaagagaacgc
ggagtcggcaagaacgaattcagcttcaaccagaagacggggcgctgcgagcattgtcag
ggcgaaggaattataacgacgcagcttcagtttatgcctgatgtggagtcggtctgtcca
tcctgcaaaggagcccggttcaacaacgacgtgctcgaggtgctgttgaatggtcggaac
atcgcacaagtgctcgatatgagcattgaagaagcggttacgttcttcgctaatcagccg
tacgttctgcataaattaaatgtgttaaatcaactgggcttaggctacctgaagctcggc
caatcttctactactctctccggtggcgaggcgcagcgaattaagctcgcgacggagatc
agtaagctgaagcgcggctcgcataatctatatattctcgacgagccgacaaccggactg
catctgcaggatattcagaagctgatcgactgcatgaatcagttggttgacaatggccat
tccgtgctcgttatcgagcatcacttggatgtcattaaggtttccgattacttaatcgat
ctgggacctgatggcggacgggacggagggatgatcgttgcacaaggaacgccggagcag
gtagctgcagttgaagcctcgcataccgggaagtttttgaaatcgattctttccacggat
catcaatattgggctgagcctatggtgagtccactgtga
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