Aquipseudomonas alcaligenes: A0T30_00495
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Entry
A0T30_00495 CDS
T04318
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0T30_00495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palc03400
]
A0T30_00495
Enzymes [BR:
palc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0T30_00495
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0T30_00495
DNA repair and recombination proteins [BR:
palc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0T30_00495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
AMR64912
LinkDB
All DBs
Position
complement(110992..111804)
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AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVTRVVVRERRLRWPIPEDLDVRLSGQRIQCVERRAKYL
LIQAESGTLIGHLGMSGNLRLVPVGTPAAKHEHVDIELESGLALRYTDPRRFGALLWSSD
PLNHELLAKLGPEPLTTAFDGERLFQQSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGSISRARYVKLAEEIKRILAHAIERGGTTLRDFIGGDGQPGYFQQELFAYGR
GGEFCKVCGTTLREVKLGQRASVYCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactacccgaagtcgaaaccacccgccgtggcattgccccccatctcgagggg
cagcgcgtcacccgcgtggtggtgcgcgagcgccgcctgcgctggccgattcccgaggac
ctcgatgtgcgcctgtccggccagcgcatccagtgcgtcgagcggcgcgccaagtacctg
ctgatccaggccgagagcggcacgctgatcggccacctgggcatgtccggcaacctgcgc
ctagtgccggtgggtacgccggcggccaagcacgagcatgtcgacatcgagctggagtcg
ggactggcgttgcgctacaccgacccgcggcgcttcggtgcgctgctgtggagcagcgac
ccgctgaaccatgagctgctggccaagctggggcctgagccgctgaccacggctttcgac
ggtgagcgcctgttccagcagtcgcgtgggcgcagcatggcggtcaagcccttcatcatg
gacaacgcggtggtggtcggcgtgggcaatatctatgcgacggaagcgctgttcgcggcc
ggcatcgatccgcgccgcgaggccggctccatctcgcgggcgcgctatgtgaaactggcc
gaagagatcaaacgtatccttgcccatgccatcgagcgcggcggtacgaccctgcgcgac
ttcatcggtggtgacggccagccgggttatttccagcaggagctgttcgcctatggtcgt
ggcggcgagttctgcaaggtttgcggcaccaccctgcgcgaggtgaaactgggccagcgc
gccagcgtgtactgcccgaaatgccagcgctag
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