Aquipseudomonas alcaligenes: A0T30_01605
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Entry
A0T30_01605 CDS
T04318
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc03420
Nucleotide excision repair
palc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0T30_01605 (uvrD)
03430 Mismatch repair
A0T30_01605 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palc03400
]
A0T30_01605 (uvrD)
Enzymes [BR:
palc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0T30_01605 (uvrD)
DNA repair and recombination proteins [BR:
palc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0T30_01605 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A0T30_01605 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMR65125
LinkDB
All DBs
Position
345479..347680
Genome browser
AA seq
733 aa
AA seq
DB search
MHKDPALLDPELLLASLNDAQCQAVAAPLGRQLVLAGAGSGKTRVLVHRIAFLIQFLNAS
PYSILSVTFTNKAAAEMRQRIEQMLGQSPAGMWVGTFHGLAHRILRAHWQEAGLSENFQI
LDSDDQQRLVKRVIRELGLDEQRWPAKQAQWFINGQKDEGLRPKNIQPGGDLFLATMLKI
YQAYEDACARTGVIDFAELLLRALDLWRDKPDLLAHYQKRFRHILVDEFQDTNAVQYAWL
RFLAKGGESLMVVGDDDQSIYGWRGAKIENIQQFSSDFPDTQLIRLEQNYRSTAGILKAA
NALIANNNGRLGKELWTEGSDGEPISLYAAFNEHDEARYVVESIEAALRKDGLKRSEIAI
LYRSNAQSRVLEEALLREKIPYRIYGGQRFFERAEIKNAVAYLRLLDGRHNDAALERVIN
VPTRGVGEKTVEAIREHARHSDLSMWAAMQQLIANKALPGRAAGALSGFIELIENLAAKV
LDMPLHLMTQTVIEQSGLIAWHQAEKGEKAQARVENLEELVSAARNFENEEEEMSPLAAF
LTHASLEAGDTQAEEHEDCVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEEPGRLEE
ERRLAYVGVTRAMQQLVLTYAETRRLYGSETYNKVSRFVREIPPALIQEVRLSNSVSRPY
SAPSRSMSGGSMFAGAAVPETPFNLGQAVRHSLFGEGVILNFEGSGAQARVQVNFASEGS
KWLMLAYAKLEAV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagatcccgcccttctcgaccccgaacttctcctcgcctccctcaacgatgcg
cagtgccaggccgtggccgcgccgctcggccgccagctggtgctggccggcgcaggttca
ggcaagacccgcgtgctggtgcaccgcatcgccttcctgatccagttcctcaacgcctcg
ccctactcgatcctgtcggtgaccttcaccaacaaggccgccgccgagatgcgccagcgt
atcgagcagatgcttggccagagcccggccggcatgtgggtcggcaccttccacggcctg
gcccaccgcatcctgcgcgcgcactggcaggaggccgggctcagcgagaacttccagatc
ctcgattccgacgaccagcagcgcctggtgaaaagggtgatccgcgagctgggcctggac
gagcagcgctggccggccaagcaggcgcagtggttcatcaacgggcagaaggacgagggc
ctgcggccgaagaatatccagcccggcggcgacctgttcctcgccaccatgctgaagatc
taccaggcctatgaagacgcttgtgcgcgcaccggggtgatcgatttcgccgaactgctg
ctgcgcgcgctggacctgtggcgcgacaaacccgacctgctggcgcactaccagaagcgc
ttccgccacatcctggtcgacgagttccaggacaccaacgccgtgcagtacgcctggctg
cgcttcctcgccaagggtggcgagagcctgatggtggtcggcgacgacgaccagtcgatc
tatggctggcgtggcgccaagatcgagaacatccagcagttctccagcgacttccccgac
acccagctgatccgcctggagcagaactaccgctccaccgccggcatcctcaaggccgcc
aacgcgctgatcgccaacaacaacgggcgcctcggcaaggagctgtggaccgagggcagc
gacggcgagccgatcagtctgtacgccgccttcaacgagcacgacgaggcgcgctacgtg
gtcgagtcgatcgaggcggcgctgcgcaaggacggtctcaagcgcagcgagatcgccatc
ctctaccgctccaacgcccagtcgcgggtgctggaagaggccctgctgcgcgagaagatt
ccctaccgcatctacggcggtcagcgcttcttcgagcgcgccgagatcaagaacgcggtg
gcctacctgcgcctgctcgacggccgccacaacgacgccgcgctggagcgggtgatcaac
gtgccgacccgtggcgtcggcgagaagaccgtcgaggccatccgcgagcacgcccgccac
agcgacctgtcgatgtgggcggcaatgcagcagctgatcgccaacaaggccctgcccggc
cgcgccgccggcgcgctgagcggcttcatcgagctgatcgaaaacctcgccgccaaggtg
ctggacatgccgctgcacctgatgacccagaccgtcatcgagcagagcgggctgatcgcc
tggcaccaggccgagaagggcgagaaggcccaggcgcgggtggaaaacctggaggaactg
gtcagcgccgcgcgcaacttcgagaacgaggaagaggagatgagcccgctggccgccttc
ctcacccacgcctcgctggaagccggcgacacccaggccgaggagcacgaagactgcgtg
cagctgatgaccctgcacagcgccaagggcctggagttccccctggtgttcctggttggc
atggaggagggcctgttcccgcacaagatgagcctggaagagcccggccgcctcgaggaa
gagcgccgcctggcctatgtcggcgtgacccgcgccatgcagcagctggtgctgacctac
gccgaaacccgccgcctgtacggcagcgagacctacaacaaggtctcgcgcttcgtccgc
gaaatcccgccggcgctgatccaggaagtgcgtctctccaacagcgtcagccgcccctat
tcggcgccgagccgcagcatgagcggcggctcgatgttcgccggtgcggccgtgccggag
acgcccttcaacctcggccaggccgtgcgccacagcctgttcggcgagggcgtgatcctc
aacttcgagggcagcggcgcccaggcccgtgtacaggtcaacttcgccagcgaaggcagc
aagtggctgatgctggcgtacgccaagctggaagcggtctag
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