Aquipseudomonas alcaligenes: A0T30_07405
Help
Entry
A0T30_07405 CDS
T04318
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc03030
DNA replication
palc03430
Mismatch repair
palc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0T30_07405
03430 Mismatch repair
A0T30_07405
03440 Homologous recombination
A0T30_07405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palc03032
]
A0T30_07405
03400 DNA repair and recombination proteins [BR:
palc03400
]
A0T30_07405
Enzymes [BR:
palc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0T30_07405
DNA replication proteins [BR:
palc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0T30_07405
DNA repair and recombination proteins [BR:
palc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0T30_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
AMR66202
LinkDB
All DBs
Position
1629866..1633396
Genome browser
AA seq
1176 aa
AA seq
DB search
MTASFVHLRLHTEFSLVDGLVRVKPLVKAVAAAGMPAVAVTDMSNMCSLVKFYKTAMGAG
IKPICGADIWLASPEEDGPLSRLTLLVMNAKGYRNLTELISRGWAEGQDNGLVIIQRDWV
KESAEGLIALSGAREGEVGMALLAGEGARAEAFLNEWLAVFPERFYLEVQRTNRVNDEEH
LHAAVELAGRTGVPLVATNDVRFLKQGDFEAHETRVCIGEGRTLDDPRRPRNYSEEQYLK
TPQEMAELFSDLPEALQNTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EDRLRVLLPRDTPDYEAKKQVYIDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYVA
DKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEAAYEQEE
VLRDFLKSDEEAQEIWDMALKLEGIVRGTGKHAGGVVIAPTKLTDFAPTSCDEEGGGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWAMETIHRIQKRDGAADEELINIDFIPLDDKKT
YDMLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKH
GREQLSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKK
PEEMAKQRGGFIEGCANNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKA
HYPAPFMAAVLSADMHNTDKVVILIEECRNMKLRIDAPDVNTSEFKFTVNDDGRIVYGLG
AVKGVGEGPVEAIVECRAEGGPFKDLFDFCNRVDLKRINKRTLEALIRSGALDRLGPYYQ
DELKAYQASVDLNRAVLLAAMEEAVQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRK
ARELSIKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELRAARDTQTIAGLIVAL
RVMKNKKGDKMGFITLDDRSGRIEASLFADAFASAQALLQTDALVVVEGEVSNDEFSGGL
RLRAKRVMSLEEARTGLAESLRIRAPREALAGDRLRWLGELFAKHRGACPLTLDYSGSEA
KAVLQFGEQWRIDPADNLIQALRDQFGKDNVFLQYR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccagcttcgtccatctgcgcctgcacaccgagttctccctggtcgacgggctg
gtgcgggtcaaacccctggtcaaggccgtggcggcggccggtatgccggccgtggccgtc
accgacatgagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggcgccgatatctggctggccagcccggaagaggatggcccgctg
tcgcgcctgaccctgctggtgatgaatgccaagggctaccgcaacctgaccgagctgatt
tcccgtggctgggccgagggccaggacaacggcctggtgatcatccagcgcgactgggtc
aaagagtccgccgaggggctgatcgccctgtccggcgcgcgcgagggcgaggtcggcatg
gccttgctggccggcgagggcgcccgcgccgaggccttcctcaatgaatggctggcggta
ttcccggagcgcttctacctggaagtgcagcgtaccaaccgggtcaatgacgaggagcac
ctgcacgcggccgtcgagctggccgggcgcaccggcgtgccgctggtggcaaccaacgac
gtgcgtttcctcaagcagggcgacttcgaggcacatgaaacccgcgtgtgcatcggcgag
ggccgtaccctcgacgacccgcggcggccgcgcaactactccgaggagcagtacctcaag
acgccgcaagaaatggccgagctgttctccgacctgcccgaggcgctgcagaacacggtg
gagatcgccaagcgctgcaacatcgaggtgcagctgggcaagtacttccttccagacttc
cctacgcccaatggcatgggcatcgacgactacctgcggcatgcctccttcgagggcctg
gaggatcgtctacgcgtcctgttgcccagggacacgccggactacgaggcgaagaagcag
gtctatatcgaccgcctcaacttcgagctcgacatcatcatccagatgggtttccccggt
tactttctcatcgtgatggacttcatccagtgggcgaagaacaacggcgtgccggtgggg
ccgggccggggttcgggtgccggctcgctggtggcctacgtgctgaagatcaccgacctc
gatccgctggcctatgacctgctgttcgagcgcttcctcaaccccgaacgtatttccatg
cccgacttcgacgtcgacttctgcatggacggtcgcgaccgggtgatcgactacgtggcc
gacaagtacggacgcaacgcggtgagccagatcatcaccttcggctcgatggcggccaag
gcggtggtgcgtgacgtggcgcgggtgcagggcaagtcctacggcctggccgaccgcctg
tcgaagatgattcccttcgaggtcggcatgaccctggaagccgcctacgagcaggaagag
gtgctgcgcgacttcctcaagagcgacgaggaagcccaggaaatctgggacatggcgctc
aagctcgaaggcatcgtgcgcggcaccggcaagcacgctggtggcgtggtgatcgcgccg
accaaactgaccgatttcgcgccgacctcctgcgacgaggaaggtggcggtctggtgacc
cagttcgacaaggatgacgtcgagcaggccggcctggtgaagttcgacttcctcggcctg
cgtaccctgaccatcatcaagtgggcgatggagaccatccatcgcatccagaagcgcgat
ggtgctgcggacgaagagctgatcaacatcgacttcatcccgctggatgacaagaagact
tacgacatgctgcagaaggcggagaccaccgcggtcttccagctcgaatcgcgcggcatg
aaggagctgatcaagaagctcaagccggactgcctggaagacatgatcgcactggtggcg
ctgttccgccccggtccgctgcagtcgggcatggtggacgacttcatcaaccgtaagcac
ggccgcgagcagctctcctacccgcacccggattaccagtacgcgggcctggagccggtg
ctcaagcccacctacggcatcatcctgtaccaggaacaggtgatgcagattgcccaggtg
atggccggctacaccctcggcggcgccgacatgctgcgccgcgccatgggcaagaagaag
cccgaggagatggccaagcagcgcggtggtttcatcgagggctgcgccaacaacggcatc
gatgccgacctggcgggcaacatcttcgacctggtggagaaattcgccggttacggcttc
aacaagtcgcactcggccgcctacggcctggtttcctaccagaccgcctggctcaaggcg
cactacccggcgccgttcatggcagcggtgctgtcggcggatatgcacaacaccgacaag
gtggtgatcctcatcgaggaatgccgcaacatgaagctgcgcatcgatgcgccggacgtg
aacacctcggagttcaagttcaccgtcaatgacgacgggcgcatcgtctacggcctgggc
gcggtcaagggtgtgggtgaagggccggtggaagccatcgtcgagtgccgcgcggagggt
gggccgttcaaggacctgttcgacttctgcaaccgcgtcgacctcaagcgcatcaacaag
cgcaccctggaggcgctgatccgctccggcgcgctggaccgcctcggtccctactaccag
gacgagctcaaggcctatcaggccagcgtcgacctcaaccgcgccgtgttgctggcggcc
atggaagaagcggtgcaggccgccgagcagactgcgcgcagccatgacagtggccacatg
gacctgttcggcggagtgttcgccgagcccgaggcggacgtctacgccaaccatcgcaag
gcgcgcgagctgtcgatcaaggagcgcctgaaaggcgagaaggacacgctcggcctgtac
ctcaccggacacccgatcgacgagtacgaaggcgaggtgcgccgcttcgcccgccagcgc
atcgtcgagctgcgtgccgcgcgcgatacccagaccatcgccggcctgatcgtggccctg
cgggtgatgaagaacaaaaagggcgacaagatgggcttcatcactctcgatgaccgttcc
gggcggatcgaggcgtcgctgttcgccgatgccttcgccagcgcccaggcgctgctgcag
accgacgcgctggtggtggtcgagggcgaggtcagcaacgacgagttttccggcggcctg
cgcctgcgcgccaagcgcgtgatgagtctggaggaggcacgtaccggcctggccgagagc
ctgcgcattcgcgcgccgcgcgaagcgctggctggagaccgcctgcgctggctcggcgag
ctgttcgccaagcatcgcggcgcctgtccgctgaccctggactacagcggcagcgaggcc
aaggcggtgctgcagttcggcgagcagtggcgcatcgacccggcggacaacctgatccag
gcgttgcgtgaccagttcggcaaagacaacgtcttcctccaataccgctga
DBGET
integrated database retrieval system
