Aquipseudomonas alcaligenes: A0T30_09335
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Entry
A0T30_09335 CDS
T04318
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0T30_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palc03400
]
A0T30_09335
DNA repair and recombination proteins [BR:
palc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0T30_09335
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0T30_09335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMR66558
LinkDB
All DBs
Position
2035372..2037387
Genome browser
AA seq
671 aa
AA seq
DB search
MSQFQLVTRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKSFFPNNSVEYFVSYYDYYQPEAYVPASDTFIEKDASINDHIEQ
MRLSATKALIERPDAIVVATVSSIYGLGSPEEYLKMVLHIDRGDKMDQRALLRRLAELQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLAAFDPLTGEVIQKLPRF
TFYPKSHYVTPRETLLEAVEHIKVELKERLDYLRTNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEPPPTLYDYLPAESLLVIDESHVTVPQIGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFEEWEAASPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPL
IEVRPARTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTDYLADHDVKVRYLHSDIDT
VERVEIIRDLRTGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNMTGSMERAIGETERRRNKQLAFNEANGIVPKGVKKDIRDILEGAVV
PGARSNKRKAAAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtttcagctcgtcacccgcttcaagcctgccggcgatcagcccgaggcgatc
cgccagatggtcgagggcctggaggccggcctgtcgcaccagaccctgctgggcgtgacc
ggctcgggcaagaccttcagtatcgccaacgtgatcgcccaggtgcagcggccgaccctg
gtgctggcgccaaacaagaccctggcggcgcagctgtacggcgagttcaagagcttcttc
ccgaacaactcggtggagtatttcgtctcttattacgactactaccagccggaggcctat
gtaccggcctcggacacctttatcgagaaggacgcttcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgatcgagcggccggacgccatcgtcgtcgccact
gtctcctccatctacggcctgggtagcccggaggagtacctgaagatggtgctgcacatc
gaccgtggcgacaaaatggaccagcgcgcgctgctgcgccgcctggccgagctgcagtac
acccgcaacgacatggactttgcccgcgccaccttccgcgtgcgtggcgacgtgatcgac
atcttcccggccgaatcggacctggaggcgatccgtgtcgaactgttcgacgacgaggtg
gagagcctggcggccttcgatccgctgaccggcgaggtgatccagaagctgccgcgcttc
accttctaccccaagagccactacgtgaccccgcgcgagaccctgctggaggcggtggag
cacatcaaggtcgagctcaaggagcgcctggactacctgcgcaccaacaacaagctggtg
gaggcgcagcgcctggagcagcgcacccgcttcgacctggagatgatcctcgagctgggc
tactgcaacggcatcgaaaactactcgcgctacctctccggtcgcgcgccgggcgagccg
ccgcccactctttatgactacctgccggccgagtcgctgctggtgatcgacgaatcgcac
gtcaccgttccgcagatcggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtcgagtacggcttccgcctgccgtcggcgctggacaaccggccgatgcgcttcgaggaa
tgggaggcggccagcccgcagaccatcttcgtctccgccacgcccggcccctacgaggcc
gagcacgccgggcgggtgattgagcaggtggtgcgccccaccggcctggtcgaccccctg
attgaggtgcgcccggcgcgtacccaggtcgacgacctgctgtcggaaatccgcaagcgc
gtggcggtcgaggagcgggtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgactacctggccgaccacgacgtcaaggtgcgctacctgcactcggacatcgacacg
gtggagcgggtggagatcatccgcgatctgcgtaccggcgccttcgacgtgctggtgggc
atcaacctgctgcgcgaaggcctggacatgcccgaggtatcgctggtggccatcctcgat
gccgacaaggaaggcttcctgcgcagcgagcgctcgctgatccagaccatcggccgcgcc
gcgcgcaacctcaacggcaaggccatcctctatgccgacaacatgaccggctcgatggag
cgcgccatcggcgagaccgagcggcggcgcaacaagcagttggccttcaacgaggccaac
ggcatcgtgcccaagggggtcaagaaggatatccgcgacatcctcgaaggcgccgtggtg
ccgggggcgcgcagcaacaagcgcaaggccgcggccaaggcagccgaggagagcgcccgc
tacgaggccgagctgcgctcgccgagcgagatcaccaagcgcatccgccagctggaagag
aagatgtaccagctggcccgcgatctggagttcgaggccgccgcgcagctgcgtgacgag
atccagaagctgcgtgaccgcctgctgcaggtctga
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