Aquipseudomonas alcaligenes: A0T30_11340
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Entry
A0T30_11340 CDS
T04318
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc02020
Two-component system
palc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A0T30_11340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A0T30_11340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
palc02022
]
A0T30_11340
02035 Bacterial motility proteins [BR:
palc02035
]
A0T30_11340
Two-component system [BR:
palc02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
A0T30_11340
Bacterial motility proteins [BR:
palc02035
]
Flagellar system
Flagellar assembly proteins
Others
A0T30_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
MCM
AAA_3
HTH_20
HTH_30
MerR
AAA
AAA_2
Mg_chelatase
Sigma70_r4_2
AAA_19
HTH_24
nSTAND3
HTH_23
FleQ
HTH_11
HTH_28
RsiG
AAA_22
ATPase
HTH_17
HTH_1
AAA_7
NB-ARC
Myosin_head
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AMR66927
LinkDB
All DBs
Position
2453613..2455043
Genome browser
AA seq
476 aa
AA seq
DB search
MTAKVLLVEDDRALREALADTLMIGGHEFRAVECAEDAVAALGEEAFSLVISDVNMPGMD
GHQLLGLIRARYPQLPVLLMTAYGAVERAVDAIRQGAADYLVKPFEPRTLLDLVARHALG
RVQADAGEGPVACEPASQQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSKRADG
RFIAINCAAIPDNMLEATLFGHEKGAFTGAIAAQPGKFELADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPINLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRA
LRERPADILPLAERLLAKHVKKMNHAAVQLSPQARAALVAHAWPGNVRELDNAIQRALIL
QQGGLIQPHDLCLTAPIGMAPTPVLSVVAANPAPAAAAIGNLPPLDGPGVVVEGAGALGE
DLRRREFQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLYAS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaaggttctgctggtcgaagacgaccgcgcgctgcgcgaggcccttgccgat
acgctgatgatcggcgggcatgagttccgtgccgtggaatgcgccgaggatgccgttgcc
gcgctgggcgaagaggcgttcagcctggtgatcagcgacgtcaacatgccgggcatggac
ggtcaccagctgctgggcctgattcgcgcccgctacccgcagctgccggtgctgctgatg
accgcctatggcgccgtcgagcgtgccgtcgatgccatccgccagggcgccgccgattac
ctggtcaagccgttcgagccgcgcaccctgctggatctggtagcgcgtcatgcgctgggg
cgcgtccaggctgacgcgggtgaggggccggtagcctgcgagccggccagccagcagctg
ctggagctggctgcgcgggtggccaggagtgattccaccgtgctgatttccggcgagtcc
ggcaccggcaaggaagtgctggcccgctacatccatcagcagtccaagcgcgctgatggc
cgcttcatcgccatcaactgtgcggcgattcccgacaacatgctcgaggccaccctgttc
ggtcacgagaagggcgccttcaccggtgcgattgccgcgcagccgggcaagttcgagctg
gccgatggcggcaccattctgctggacgagatttccgagatgccgctgggactgcaggcc
aagctcctgcgcgtgctgcaggagcgtgaagtggagcgggttggcgcgcgcaagccgatc
aacctggacatccgcgtgctggccaccaccaaccgcgacctggccggcgaggtggcggcc
gggcgcttccgtgaagacctctactatcgcctgtcggtgttcccgctggcctggcgcgcg
ttgcgcgagcgtcccgccgatattctgccgctggccgagcgcttgctggccaagcacgtc
aaaaaaatgaaccatgccgccgtgcagctttcccctcaggcccgtgccgccctggtggcg
catgcctggccgggcaacgtgcgcgagctggataacgccatccagcgcgcgctgatcctg
cagcagggcgggctgatccagccacacgacctgtgtctgaccgcacccattggcatggcg
ccgacgccggtcctgagtgtggtggcggcgaatccggcgcctgccgccgcggcgatcggc
aacttgccgccgctggatgggccgggcgtggtggtcgagggcgccggcgccctgggcgaa
gatctgcgtcgccgcgagttccagatgatcatcgacaccctgcgcgccgagcgcggtcgc
cgcaaggaagccgccgagcgtctgggcatcagcccgcgcaccctgcgttacaagctggcg
cagatgcgcgatgccggcatggatgtcgaggcctacctctacgccagctga
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