Aquipseudomonas alcaligenes: A0T30_15800
Help
Entry
A0T30_15800 CDS
T04318
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
palc
Aquipseudomonas alcaligenes
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palc03021
]
A0T30_15800
Transcription machinery [BR:
palc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A0T30_15800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMR67759
LinkDB
All DBs
Position
3455812..3458661
Genome browser
AA seq
949 aa
AA seq
DB search
MASSGTVQYQPGQRWISDSEAELGLGTILTSDGRLLTVLYPATGETRQYSLRNAPLTRVR
FAPGDEITHFEGWKLTVQEVEDIDGLLVYHGFDAEHRPVSLPETQLSNFIQFRLASDRLF
AGQIDPLNWFALRYHTLEHQSRLLQSSLWGLGGARAQPIAHQLHIARMVADRIAPRVLLA
DEVGLGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFA
ESDADNPFEDTQLALVSLEWLKDSDKAQDAAFAAGWDLLVVDEAHHLVWHPEKASDEYRL
VEQLAEVIPGVLLLTATPEQLGLESHFARLRLLDPDRFHDLDAFRAESANYRPVAEAVQE
LLDEGRLSEKAHATIARFLGAEGEALLGAVSDGDSEAAARLIRELLDRHGTGRVLLRNTR
AAVQGFPERLLHPYPLPNPEQYAALEPGEHAELYPEVRYQAQGDDESWWRFDPRVDWLID
TLKMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIQLHVPYLEDS
PQERLFQWYHQALNAFLNTCPTGNALQHQFGPRLLPLLEDHAEGAWNALLSEATAERERL
EGELHSGRDRLLELNSGGAGEGERLVEEILEQDDQFALPIYMEELFDAFGIDSEDHSENA
LVLRPSEKMLDASFPLGDDEAVTVTYDRNQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLYVSEVVAPKALQLGRFLPPVALRSLLDPNGNDLASKVA
FDTLNDQLETVPRASANKFVQAQRDVLAKQINAAEAKIAPRHSSRVEEARQRFTATLDEE
IARMSALQAVNPSVRPAEIEALRKQRESGLAFLDKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagtggcactgtgcagtaccaaccggggcaacgctggatcagcgacagcgag
gcggaactcggcctgggcaccatcctcacttccgacggccgcctgctcaccgtgctctat
ccggccaccggcgaaacccgccagtactcgctgcgcaacgccccgctgacgcgcgtgcgc
ttcgccccgggcgacgagatcacccacttcgagggctggaagctgaccgtgcaggaagtt
gaggacatcgacggcctgctggtctaccacggcttcgacgccgagcaccgcccggtcagc
ctgccggaaacccagctgtccaacttcatccagttccgcctggccagcgaccgcctgttc
gccgggcagatcgacccgctgaactggttcgccctgcgctaccacaccctggagcaccag
agccgcctgctgcagtccagcctgtggggcctgggcggcgcccgcgcccagccgatcgcc
caccagctgcacatcgcgcgcatggtcgccgaccgcatcgccccgcgcgtgctgctggcc
gacgaagtgggcctgggcaagaccatcgaggctggcctggtgatccaccgccagctgctc
tccggccgtgccagccgggtgctgatcctggtcccggagaacctgcagcaccagtggctg
gtggagatgcgccggcgcttcaacctgcaggtggcgctgttcgatgccgaacgcttcgcc
gaaagcgatgccgacaacccgttcgaggacacccagctggcgctggtctccctggagtgg
ctgaaggacagcgacaaggcccaggacgccgccttcgccgccggctgggacctgctggtg
gtcgacgaggcccaccacctggtctggcacccggagaaggccagcgacgaataccgcctg
gtcgagcaactggccgaagtcatccccggcgtgctgctgctcactgccaccccggagcag
ctgggcctggaaagccacttcgcgcgcctgcgcctgctcgacccggaccgcttccacgac
ctcgacgccttccgtgccgagagcgccaactaccgcccggtggccgaagcggtgcaggag
ctgctcgacgaaggccgcctgtccgagaaggcccacgccaccatcgcgcgcttcctcggc
gccgagggcgaggcgctgctgggcgccgtcagcgacggcgacagcgaggccgccgcgcgg
ctgatccgcgagctgctcgatcgccacggcaccggccgcgtgctgctgcgcaacacccgc
gccgccgtgcagggcttccccgagcgtctgctgcacccctacccgctgcccaaccccgag
cagtacgccgcgctggagccgggcgagcacgccgagctgtaccccgaggtacgctaccag
gcgcagggcgatgacgaatcctggtggcgcttcgacccgcgcgtcgactggctgatcgac
accctgaagatgctcaagaagttcaaggtgctggtgatctgcgctcatgccgagactgcg
cttgacctggaagacgccctgcgtgtgcgctccggcatcccggccacggtgttccacgag
ggcatgagcatcctcgagcgcgaccgcgccgccgcctacttcgccgacgaggaattcggc
gcccaggtgctgatctgctccgagatcggctccgaaggccgcaacttccagttcagccac
catctggtgctgttcgacctgccggcccacccggacctgctggaacagcgcatcggtcgt
ctcgaccggatcggccagaagcacaccatccagctgcacgtgccctacctcgaggacagc
ccgcaggagcgcctgttccagtggtaccaccaggcgctgaatgccttcctcaatacctgc
ccgaccggcaacgccctgcagcaccagttcggtccacgcctgctgccgctgctggaagac
cacgccgagggcgcctggaacgccctgctgagcgaggccaccgcagaacgcgaacgcctc
gaaggcgagctgcacagcggccgtgaccgcctgctggagctcaattccggcggcgccggc
gagggcgagcggctggtcgaggaaatcctcgaacaggacgatcagttcgccctgccgatc
tacatggaggagctgttcgacgccttcggcatcgacagcgaggaccactcggagaacgcc
ctggtgctgcgccccagcgagaagatgctggacgccagcttcccgctcggcgacgacgag
gcggtcaccgtcacctacgaccgcaaccaggccctggcgcgcgaggacatgcagttcctc
acctgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgatgggc
aacaccgcggtggcgctgatcaagaacaaggcgctcaagcccggtaccgtgctgctggaa
ctgctgtatgtcagcgaagtggtggcgcccaaggcgctgcagctgggccgcttcctgccg
ccggtggcgctgcgcagcctgctcgacccgaacggcaacgacctggccagcaaggtcgcc
ttcgacaccctcaacgaccagttggagaccgtgccacgtgccagcgccaacaagttcgtg
caggcccagcgtgacgtgctggccaagcagatcaatgccgccgaggcgaagatcgcgccg
cgccacagcagccgcgtggaagaagcgcggcagcgcttcaccgccaccctggacgaggaa
atcgcccgcatgagcgcactgcaggcggtcaacccgagcgtgcgcccagccgagatcgaa
gccctgcgcaagcagcgcgagagcggcctggccttcctcgacaaggcggccctgcgcctg
gaggcaatccgcgtgctggtggcgggctaa
DBGET
integrated database retrieval system
