Aquipseudomonas alcaligenes: A0T30_18790
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Entry
A0T30_18790 CDS
T04318
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
palc
Aquipseudomonas alcaligenes
Pathway
palc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A0T30_18790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
palc02022
]
A0T30_18790
02035 Bacterial motility proteins [BR:
palc02035
]
A0T30_18790
Two-component system [BR:
palc02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
A0T30_18790
Bacterial motility proteins [BR:
palc02035
]
Pilus system
Twitching motility proteins
A0T30_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_50
AAA_5
AAA_16
Pre_tape_measure
HTH_30
AAA_19
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AMR68317
UniProt:
A0AA42STI2
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Position
4069809..4071149
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AA seq
446 aa
AA seq
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MSTRQRALIVDDEPDIRELLEITLGRMKLDTRSARNVKEAREWLAREPFDLCLTDMRLPD
GTGLELVQHIQQRHAEVPVAMITAYGSLDTAINALKAGAFDFLTKPVDLGRLRELVATAL
RLRSGETTEGPVDTRLLGESPPMKALRNQIQKLARSQAPVYISGESGSGKELVARLIHEQ
GPRAEKPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAANGGTLFLDEVADL
PLAMQVKLLRAIQEKAVRAVGGQQEVVVDVRILCATHKDLAAEVAAERFRQDLFYRLNVI
ELRVPPLRERREDIPLLADTMLKRLAEGSGLPAARLSLEALDKLKCYRFPGNVRELENML
ERAYTLCENDQIQADDLRLADAAPAGESGEASLAQIDNLEDYLEEIERKLIMQALEETRW
NRTAAAQRLGLTFRSMRYRLKKLGID
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccggcagagagccctgatcgtcgacgacgagcccgatatccgcgaactcctg
gagatcaccctggggcgcatgaagctcgacactcgcagcgcccgcaacgtcaaggaagcc
cgcgagtggctggcccgggagcctttcgacctgtgcctgaccgacatgcgcctgcccgat
ggcaccggcctggaactggtccagcacatccagcagcgccatgccgaagtaccggtcgcc
atgatcacggcctacggcagcctggacaccgcgatcaacgccctcaaggccggtgccttc
gacttcctcaccaagccggtggacctcggccgcctgcgcgagctggtcgccaccgccctg
cgcctgcgcagcggcgaaaccacggagggaccggtagacacccgcctgctcggcgaatcg
ccgccaatgaaggcgctgcgcaaccagatccagaagctcgcgcgcagccaggcgccggtc
tatatcagcggcgagtccggtagcggcaaggagctggtggcgcgcctgatccacgagcaa
ggcccgcgcgccgaaaaacccttcgtaccggtcaactgcggcgccatcccgtcagaactg
atggaaagcgaattcttcggccacaagaagggcagctttaccggcgcgatagaggacaag
cagggcctgttccaggcggccaatggcggcaccctgttcctcgacgaagtggccgaccta
ccgctggccatgcaggtcaagctgctacgcgccattcaggaaaaagccgtgcgcgccgtc
ggcggtcaacaggaggtggtggtggacgtgcgcatcctctgcgcaacacacaaggatctg
gctgccgaagtcgccgcagagcgcttccgtcaggatctgttctatcgcctgaacgtcatc
gagctgcgcgtaccgccgctacgcgagcgccgtgaggacatcccgctgctggctgacacc
atgctcaaacgcctcgccgagggcagcggcctgccggcggcccgcctgagcctggaggcg
ctggacaagctcaagtgctaccgctttcccggcaacgtgcgcgaactggagaacatgctg
gagcgcgcctacaccctgtgcgagaacgaccagattcaggccgacgatctgcgcctggca
gatgcagcaccagcgggcgagagcggcgaggcctcgctggcgcagatcgacaacctggaa
gactatctggaagagatcgagcgcaagctgatcatgcaggctctcgaggaaacccgctgg
aaccgcaccgccgccgcccagcgcctcggcctgaccttccgctccatgcgctaccgcctg
aagaagctgggcattgactga
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