Aquipseudomonas alcaligenes: A0T30_20290
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Entry
A0T30_20290 CDS
T04318
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
palc
Aquipseudomonas alcaligenes
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palc03009
]
A0T30_20290
Enzymes [BR:
palc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A0T30_20290
Ribosome biogenesis [BR:
palc03009
]
Prokaryotic type
rRNA helicases
A0T30_20290
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AMR68793
LinkDB
All DBs
Position
4392395..4393729
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AA seq
444 aa
AA seq
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MRDNLAALGYAEMTPIQAASLPLILKGRDLIAQAKTGSGKTAAFGIGLLHPLNPRFFGCQ
ALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVPLGPQIGSLEHGAHIIVGTPGRI
QEHLRKGTLKLDGLNTLVLDEADRMLDMGFFDSIAEVIEQTPAKRQTLLFSATYPAGIEQ
LAARFLRDPERVQVEAMHDDGQIEQRFYEIDPKQRMDAVIRLLRHFRKQPAVAFCATRQQ
CDELAALLESEKISAAALHGDLEQRDRDQVLTLFANRSLSVLVATDVAARGLDVAGLELV
INVELARDAQIHIHRIGRSGRAGEKGLALSLVAPSEAYRAQAIEELQGSPLTWQLLGELK
DKGEALLPPMHSLCLAAGRKDKLRPGDILGALTGDAGIPGDKVGKIAIFDYQAYVAVERS
VAREALQRLQSGKIKGRAVKVRML
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacaacctcgccgcgctcggctacgccgaaatgacgccgatccaggccgccagc
ctgccgctgatcctcaagggccgcgacctgatcgcccaggccaagaccggcagcggcaag
accgccgccttcggcatcggcctgctgcacccgctgaacccacgtttcttcggctgccag
gcgctggtgctgtgcccgacccgcgagctggccgaccaggtggccaaggagctgcgccgc
ctggcccgcgcggcggacaacatcaagatcctcaccctctgcggcggcgtgccgctgggc
ccgcagatcggctcgctggagcacggtgcgcacatcatcgtcggcaccccggggcgcatc
caggagcacctgcgcaagggcaccctgaaactggacgggttgaataccctggtgctggac
gaagccgaccgcatgctcgacatgggcttcttcgacagcatcgccgaagtcatcgagcag
accccggccaagcgccagaccctgctgttctccgccacctacccggccggtatcgagcag
ctcgccgcacgcttcctgcgcgatccggagcgcgtgcaggtcgaggccatgcacgatgac
gggcagatcgagcagcgtttctacgagatcgaccccaagcagcgcatggacgcggtgatc
cgcctgctgcgccacttccgcaagcagccggcggtggccttctgcgccacccgtcagcag
tgcgacgaactggccgccctgctcgaatcggaaaagatttccgccgccgccctgcacggt
gacctggagcagcgcgaccgcgaccaggtgctgaccctgttcgccaaccgcagcctcagc
gtgctggtggccaccgacgtggccgcccgcggcctggatgtggccggcctggagctggtg
atcaacgtcgaactggcgcgcgatgcccagatccatatccaccgtatcggccgcagcggc
cgcgccggcgagaaaggcctggccctgtcgctggtcgctccgtccgaggcctaccgcgcc
caggccatcgaggagctgcagggcagcccgctgacctggcagctgctcggcgagctgaag
gacaagggcgaggcgctgctgccgccgatgcacagcctgtgcctggccgccgggcgcaag
gacaagctgcgtcccggtgatatcctcggcgccctcaccggtgacgccggcatccccggc
gacaaggtcggcaagatcgccatcttcgattaccaggcctatgtcgccgtggagcgcagc
gtggcccgcgaggccctgcagcgcctgcaaagcggcaagatcaagggacgcgcggtcaag
gtacggatgctctag
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