Pseudomonas alloputida: LU682_003610
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Entry
LU682_003610 CDS
T09345
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pald
Pseudomonas alloputida
Pathway
pald02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LU682_003610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pald03021
]
LU682_003610
Transcription machinery [BR:
pald03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LU682_003610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
HTH_3
HTH_24
KorB
HTH_40
ABPF_N
HTH_11
HTH_Tnp_ISL3
HTH_29
Glyoxalase_3
GAAD
HTH_10
HTH_28
FaeA
Terminase_5
HTH_Crp_2
HTH_36
Int_N
Motif
Other DBs
NCBI-ProteinID:
WJR17923
LinkDB
All DBs
Position
792159..792695
Genome browser
AA seq
178 aa
AA seq
DB search
MNASPSAPAPGFDLEELYRSHHGWIRQWLQRKLGNAHDAAELAQDVFVRLLSKPRVFNDH
EHARAYLGRMSRNACVDFWRRRRVEQAYLEVLAAQPEQLAPSLEHQAVILETLEQLQAMF
ERMPQRVAEAFSMAQLQGMKQREIAEQLGVSERSVNSYLAQAMYQCLLLEAELDGSLA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctctcccagtgctccagcccctggtttcgacctggaggaactctaccgttcc
catcatggctggattcgccagtggctccagcgcaagctcggcaatgcccatgatgcggcg
gaactggcccaggatgtattcgtgcggctgttgtccaagccccgtgtgttcaatgaccac
gagcatgcccgtgcgtacctgggacgtatgtcgcgcaatgcgtgtgtggacttctggcga
cggcggcgggtggagcaggcttatctggaagtgctggccgcccagcccgagcaacttgcg
ccttcgctggaacatcaggccgttatcctcgaaaccctcgagcaactgcaggcaatgttt
gagcgtatgccccagcgcgtggccgaggcattttccatggcgcagttgcagggcatgaag
caacgcgagatcgccgagcagttgggcgtgagcgagcgcagtgtgaacagttacctggct
caggctatgtaccaatgcctgctgctggaagccgaactggatggctcgctggcatga
DBGET
integrated database retrieval system
