Pseudomonas alloputida: LU682_004015
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Entry
LU682_004015 CDS
T09345
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_004015 (phrB)
Enzymes [BR:
pald01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LU682_004015 (phrB)
DNA repair and recombination proteins [BR:
pald03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LU682_004015 (phrB)
Prokaryotic type
LU682_004015 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WJR17997
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All DBs
Position
complement(879074..880516)
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AA seq
480 aa
AA seq
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MHLTWLRSDLRIDDNTALSASTERGPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLRQ
SLEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKS
AIQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLHRSLPALARRVKRQAPLNIG
SDPIPQHVEGFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPGTSQLS
PYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQVSRHRA
FRAQTEALPWRDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMVVAMFLSKNLL
IDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPQGRFIR
HWVPELQELDEKAIHQPIKSTDLFGNTSYLSPIVDLSSSRQRALEAFKGLPRRQNQGITS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacctggctgcgcagcgacctgcgtatcgatgacaacactgcactcagcgcc
tctaccgaacgcggcccgaccatcgccctgtggctggtcagccccggacaatggcaagcc
catgacgatgccgactgcaaagtcgacttctggctacgtaacctgcatgacctgcgccaa
tcactggaaaagctgaacatccccctgctgatccgcacaatcgatacctgggaccaggcg
ccacaggcggtgctcgatatctgccgccaacatcaggtgcaaagcgtgcactggaacgag
gagtacggcatcaatgagcagcgccgggatgatgccacccgcgcaatgttggaaaagtcg
gccatccaggcgcacagccacctcgaccagctgttcttccgtccgggcaccgtactcact
cgcagtggcgattacttccaggtgttcagccagttcaagaagacctgccttgagcatctg
caccgcagcctgcccgccctggcacggcgggtgaagcgccaggccccgctgaacatcggc
agcgacccaatcccgcaacatgtagaggggttcggaaaaaccacgcccgcattgcgcgac
cactggccagccggtgaagctgaggcacagtcccgcctgtcacgcttcctggacgaaacc
atcgacgactaccaccacttgcgcgacttgcctgccaagcctggtaccagccagctttcc
ccctacctggccgccggcgtgatttcgccccgccaatgcttgcacggtgcactggccggc
aaccggggcgagttcgacagtggcagcacaggcgtgcagacctggatcaatgagctactc
tggcgtgagttctacaagcacatcctgagcggttatccacaggtctcgcgccaccgcgcc
ttccgcgcccagaccgaagccctgccctggcgtgacgccccggcagacctggcggcctgg
gagcagggccgcaccggcttcccgatcattgatgccgccatgcgccaattgctgcacacc
gggtggatgcacaaccgcttgcgcatggtcgtggccatgttcctcagcaagaacctgctg
attgactggcgcaagggcgagcggcacttcatgcgccacctgatagacggcgacctggcc
gccaacaacgggggttggcagtggagtgcttccaccggcaccgacgcggtgccctatttc
cgtatcttcaacccggtttcacagtcgcagcgcttcgatccacagggtcggttcattcgc
cactgggtaccggaactacaggagctcgatgaaaaagccatccatcaacccattaaatcg
acggaccttttcggtaatacttcgtacctaagtccaatcgtagatctcagcagcagtcgc
cagcgggccctggaagcattcaaagggctgccacgccggcagaatcaggggataacgtct
tga
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