Pseudomonas alloputida: LU682_005190
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Entry
LU682_005190 CDS
T09345
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pald
Pseudomonas alloputida
Brite
KEGG Orthology (KO) [BR:
pald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pald03032
]
LU682_005190
03036 Chromosome and associated proteins [BR:
pald03036
]
LU682_005190
03400 DNA repair and recombination proteins [BR:
pald03400
]
LU682_005190
DNA replication proteins [BR:
pald03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LU682_005190
Chromosome and associated proteins [BR:
pald03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LU682_005190
DNA repair and recombination proteins [BR:
pald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LU682_005190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
SSPI
NTS
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WJR18225
LinkDB
All DBs
Position
1139044..1139325
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAESIAAPKATAKNALEQLGQIVADQLENGAEITLPGIGKLKVSERPAR
TGRNPSTGAAIEIAAKKVVKFVPAKVLTDAINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaccaaagaccaactgattgccgacatcgccgaatcgatcgccgcgccaaaa
gccaccgccaagaacgctctggagcaactgggccagatcgttgctgaccaactggaaaac
ggcgctgaaatcactctgccaggcatcggcaagctgaaagtctccgagcgtcctgcccgt
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtcgtcaag
ttcgttccagccaaagtgctgaccgacgccatcaacaagtaa
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